Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MTCO1P44-201ENST00000441935 243 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 RPL32P28-201ENST00000443577 397 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 DNAJC19P8-201ENST00000452887 259 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 MTCO3P2-201ENST00000457365 171 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AP001324.2-201ENST00000461163 319 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 RPL30P9-201ENST00000465586 330 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 RPL22P13-201ENST00000493291 347 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 SNORA48.9-201ENST00000516419 162 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 RNA5SP404-201ENST00000517118 132 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 RNA5SP291-201ENST00000517222 105 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 COPS8P3-201ENST00000526024 482 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC124293.1-201ENST00000530034 493 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 RAB11AP2-201ENST00000545905 639 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC125611.1-201ENST00000549563 229 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC090115.3-201ENST00000553218 849 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR3944-201ENST00000581277 108 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR4697-201ENST00000582977 78 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 BNIP3P23-201ENST00000599655 511 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AL355802.3-201ENST00000607571 545 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC092953.2-201ENST00000608000 699 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AL355472.4-201ENST00000610233 626 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC091834.1-201ENST00000614543 472 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC012676.2-201ENST00000619258 186 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AC097655.1-201ENST00000635075 318 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 MTND1P37-201ENST00000636562 264 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR302D-201ENST00000362275 68 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 RNA5SP327-201ENST00000362494 101 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU1-23P-201ENST00000363361 144 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR128-1-201ENST00000384921 82 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR134-201ENST00000385258 73 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR670-201ENST00000390142 98 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AL627390.1-201ENST00000396055 340 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 MTND5P25-201ENST00000430499 799 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AL135790.2-201ENST00000437701 267 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 RPS4XP11-201ENST00000446897 772 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 MTND2P24-201ENST00000453434 806 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 SNORA84-201ENST00000459229 133 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 UBL5P1-201ENST00000507979 193 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AC025465.3-201ENST00000510570 311 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU7-40P-201ENST00000516397 64 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 CENPUP1-201ENST00000526649 1202 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 CYCSP27-201ENST00000527643 293 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AC027104.1-201ENST00000563702 681 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 AL020996.3-201ENST00000606617 222 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 RMST_6.1-201ENST00000611980 203 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 DUSP12P1-201ENST00000612874 516 ntBASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC0.59□□□□□ -2.31
CHKB-CPT1BH3BT56 Z75746.1-201ENST00000440243 2080 ntBASIC0.59□□□□□ -2.32
CHKB-CPT1BH3BT56 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.59□□□□□ -2.32
CHKB-CPT1BH3BT56 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU1-22P-201ENST00000363334 158 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 SNORA51.6-201ENST00000384151 125 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 MIR597-201ENST00000384968 97 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 MIR146A-201ENST00000385201 99 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC078974.1-201ENST00000411597 223 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 ZDHHC20P2-201ENST00000424108 429 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 RPL31P54-201ENST00000429803 370 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 RPL7P34-201ENST00000433316 712 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 HMGB1P31-201ENST00000437242 427 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 RPL23AP76-201ENST00000441860 458 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 RPL9P9-202ENST00000466501 579 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC021382.1-201ENST00000483523 359 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 MTCYBP18-201ENST00000501056 747 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms