Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AL121932.1-201ENST00000605542 214 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 LINC02555-201ENST00000563933 1951 ntBASIC4.12□□□□□ -1.75
SHISA3A0PJX4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHISA3A0PJX4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 RNU6-428P-201ENST00000362942 107 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.237-201ENST00000364439 102 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.358-201ENST00000365491 99 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 RNU6-338P-201ENST00000383888 105 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.405-201ENST00000383979 100 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.451-201ENST00000384200 100 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.524-201ENST00000384564 100 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.539-201ENST00000384635 107 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.561-201ENST00000384694 100 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 MIR223-201ENST00000385204 110 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 MIR548M-201ENST00000408260 86 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 RNU2-68P-201ENST00000410878 191 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AL160275.2-201ENST00000412010 394 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AC016769.2-201ENST00000414815 475 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 DDX39BP1-205ENST00000422507 192 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AC098614.2-201ENST00000426040 255 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 RPL23AP25-201ENST00000430973 463 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 snoU13.4-201ENST00000458916 104 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AC098869.1-201ENST00000481627 292 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AC010469.2-201ENST00000496412 480 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 RNU4-71P-201ENST00000516258 113 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AC022868.1-201ENST00000517767 391 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AC010186.2-204ENST00000537668 439 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 TRAV28-201ENST00000557548 323 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 MIR1269B-201ENST00000580405 75 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AC073410.2-201ENST00000603240 332 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AC211433.2-201ENST00000608433 387 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 U6.92-201ENST00000636464 89 ntBASIC4.11□□□□□ -1.75
SHISA3A0PJX4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SHISA3A0PJX4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.29-201ENST00000362570 113 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 RN7SKP95-201ENST00000362860 303 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.123-201ENST00000363338 102 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 AL591043.1-201ENST00000432461 424 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 PIGFP3-201ENST00000441918 722 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 AC124916.1-201ENST00000444020 547 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 ISCUP1-201ENST00000454451 448 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 AC005532.2-201ENST00000467154 373 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 KC877373.1-201ENST00000479066 408 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 ANXA2P1-201ENST00000505539 926 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 AC010265.1-201ENST00000513509 211 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 RNA5SP165-201ENST00000517142 115 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 CASP1P1-201ENST00000526345 212 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 MIR4300-201ENST00000581016 96 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 AC010201.1-201ENST00000605051 540 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 Y_RNA.772-201ENST00000606692 102 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 FTX_2.1-201ENST00000618816 94 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 AC015813.6-201ENST00000624409 5808 ntBASIC4.1□□□□□ -1.75
SHISA3A0PJX4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms