Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 CBX3P4-201ENST00000538909 354 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 DUXAP1-201ENST00000556632 463 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AP001542.2-201ENST00000593141 364 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AC005261.5-201ENST00000596280 355 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AL158827.2-201ENST00000602494 330 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 uc_338.14-201ENST00000613162 166 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AC009233.1-201ENST00000616477 371 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AC120349.2-201ENST00000625002 298 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AL691447.3-201ENST00000635020 330 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 MTND5P10-201ENST00000603719 1809 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-28P-201ENST00000362378 107 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-1159P-201ENST00000362933 107 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU1-39P-201ENST00000383897 165 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-637P-201ENST00000384050 107 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 MIR9-3-201ENST00000385084 90 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-754P-201ENST00000391166 107 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AL356432.1-201ENST00000405809 419 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AC074117.2-201ENST00000417130 397 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 TOMM20P4-201ENST00000427861 435 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AC010095.1-201ENST00000443543 144 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 FABP5P13-201ENST00000452144 328 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AC140059.1-201ENST00000489238 361 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AL160314.1-201ENST00000490836 438 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AC114981.1-201ENST00000503897 678 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 MRPS33P3-201ENST00000513456 322 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 snoZ278.1-201ENST00000517059 112 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AP001189.2-201ENST00000527320 189 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 YWHAZP1-201ENST00000556286 722 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AC021739.1-201ENST00000559631 174 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC00933-203ENST00000559812 219 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AL357094.1-201ENST00000603845 844 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 AC069304.2-201ENST00000605154 435 ntBASIC1.26□□□□□ -2.21
TRAV1-1A0A0B4J248 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 UBE2L2-201ENST00000254302 429 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 SNORD114-1-201ENST00000362705 72 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU1-42P-201ENST00000364033 160 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 Y_RNA.234-201ENST00000364409 97 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 RN7SKP101-201ENST00000411376 320 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 TPMTP2-201ENST00000414372 726 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 EDDM3CP-201ENST00000415977 425 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 BX510359.4-201ENST00000423750 193 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC096920.1-201ENST00000423991 241 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 ELOCP14-201ENST00000428070 331 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 Z98742.2-201ENST00000431564 187 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 ELOCP7-201ENST00000439968 331 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 HMGN2P10-201ENST00000448085 265 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 FDX1P2-201ENST00000450769 375 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 RPL21P134-201ENST00000453468 483 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU1-98P-201ENST00000458992 160 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 FO393415.2-201ENST00000480085 343 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC027575.1-201ENST00000481064 460 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC107032.1-201ENST00000485945 480 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 RNA5SP137-201ENST00000516833 135 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC122134.1-202ENST00000569111 1201 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC024619.4-201ENST00000580924 316 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 MIR4765-201ENST00000585007 77 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC091152.3-201ENST00000604227 325 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC107075.1-201ENST00000613695 314 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC003001.2-201ENST00000616294 831 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AL357080.1-201ENST00000617394 239 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC109454.4-201ENST00000623411 649 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 AC007490.1-201ENST00000624321 703 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 MIR3199-2-201ENST00000636243 86 ntBASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TRAV1-1A0A0B4J248 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms