Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RIOK3P1-201ENST00000418778 1528 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 NACAP2-201ENST00000318548 624 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 Y_RNA.146-201ENST00000363549 102 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 RNA5SP322-201ENST00000363617 119 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 SNORD42.2-201ENST00000365570 69 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 RNVU1-14-201ENST00000384770 164 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 Y_RNA.576-201ENST00000384781 102 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 MIR514A1-201ENST00000385133 98 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 Z98941.1-201ENST00000407764 100 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 MIR1290-201ENST00000408735 78 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 RNU6-373P-201ENST00000411247 98 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AL451054.2-201ENST00000420896 202 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AL365400.1-201ENST00000431854 640 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 MTND3P2-201ENST00000438452 342 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 CBWD4P-201ENST00000445695 655 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 ANP32BP2-201ENST00000454525 545 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 RPL32P34-201ENST00000486380 400 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AL049874.1-201ENST00000489560 388 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 RPL38P4-201ENST00000502376 214 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AC025554.1-201ENST00000505641 188 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AC092436.1-201ENST00000506450 503 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 SNORA31.3-201ENST00000516029 96 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 DPPA3P3-201ENST00000603842 430 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AC007619.2-201ENST00000605743 379 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AC012603.1-201ENST00000606424 528 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AL355802.3-201ENST00000607571 545 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AC134503.1-201ENST00000633048 54 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 TPTEP1-208ENST00000636884 213 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 MTND4P27-201ENST00000450813 1354 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 AC103710.2-202ENST00000641454 2853 ntBASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCDC187A0A096LP49 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AL049781.1-201ENST00000623195 3585 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 MIR423-201ENST00000362201 94 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 RNU6-552P-201ENST00000362869 119 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 Y_RNA.184-201ENST00000363884 108 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 SNORD6-201ENST00000365444 73 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 RNU6-1160P-201ENST00000384546 104 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 SNORD37.1-201ENST00000390968 65 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 RNU6-817P-201ENST00000391083 104 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 RNU6-903P-201ENST00000391270 109 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AL513331.1-201ENST00000411908 397 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 RPL27AP8-201ENST00000424277 446 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 CALM2P2-201ENST00000428512 440 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 TXNP1-201ENST00000441872 371 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AL162395.1-201ENST00000457882 422 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 RNU6-953P-201ENST00000459154 107 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 Y_RNA.632-201ENST00000459189 102 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 Y_RNA.691-201ENST00000516611 103 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 SCARNA13-201ENST00000516672 275 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 RNU7-30P-201ENST00000516835 62 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 RNU6-677P-201ENST00000516914 101 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 RN7SKP60-201ENST00000516985 239 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AP000889.1-201ENST00000530968 660 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 RANP3-201ENST00000530970 276 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 GNRHR2P1-201ENST00000555315 631 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AC093249.1-201ENST00000567049 203 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 MIR3171-201ENST00000584270 74 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 RNU1-30P-201ENST00000606575 163 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AL773545.4-201ENST00000637262 310 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 AL513478.4-201ENST00000641636 310 ntBASIC3.59□□□□□ -1.83
CCDC187A0A096LP49 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC187A0A096LP49 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.59□□□□□ -1.84
CCDC187A0A096LP49 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms