Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU6-223P-201ENST00000362830 107 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU6-511P-201ENST00000363496 107 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU6-173P-201ENST00000364215 104 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 SNORA9.2-201ENST00000365361 133 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU6-1042P-201ENST00000384204 107 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 SNORA36C-201ENST00000384289 132 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 SNORA46-201ENST00000384762 135 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AL591034.1-201ENST00000407447 340 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 RNA5SP274-201ENST00000410484 108 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU2-8P-201ENST00000410727 190 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 RPL21P24-201ENST00000413752 448 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC245054.2-201ENST00000415639 319 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC119618.1-201ENST00000434191 222 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 RPS20P5-201ENST00000434808 360 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 USP9YP15-201ENST00000442391 422 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC008481.1-201ENST00000463278 396 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 RN7SL20P-201ENST00000488827 297 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 SNORA31.8-201ENST00000516327 108 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 Vault.3-201ENST00000516676 95 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 HMGN1P28-201ENST00000521340 364 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 ERHP1-201ENST00000523006 310 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AP003033.1-201ENST00000527244 415 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC245505.1-201ENST00000556398 224 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 BDH2P1-201ENST00000602288 736 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC245014.2-201ENST00000603689 287 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC246785.4-201ENST00000605374 287 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC004492.1-201ENST00000607036 742 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AC136475.10-201ENST00000620253 385 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 AL359740.1-201ENST00000624340 592 ntBASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSNK1G3Q9Y6M4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU6-282P-201ENST00000365357 103 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 SNORA20.2-201ENST00000383922 131 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU5A-6P-201ENST00000384136 116 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU6-278P-201ENST00000390945 109 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 PIGFP2-201ENST00000421400 651 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 HSPE1P1-201ENST00000421494 318 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 SAR1AP4-201ENST00000429225 591 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 UQCRHP3-201ENST00000451503 251 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 MTCO2P29-201ENST00000465212 189 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 SNORD59.2-201ENST00000516873 68 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 ARL2BPP2-201ENST00000550907 489 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AC138761.3-201ENST00000579993 334 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AC105224.1-201ENST00000587055 421 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AP001029.3-201ENST00000588063 596 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AL022154.1-201ENST00000604698 785 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AC008277.2-201ENST00000605196 797 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AL136363.1-201ENST00000605349 337 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AL021997.1-201ENST00000605757 193 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 AC107871.2-201ENST00000612894 502 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.87□□□□□ -1.95
CSNK1G3Q9Y6M4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 AC005832.2-201ENST00000538921 1430 ntBASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU6-169P-201ENST00000365336 107 ntBASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU6-39P-201ENST00000384344 107 ntBASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 Y_RNA.516-201ENST00000384541 124 ntBASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU6-192P-201ENST00000391253 100 ntBASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 RNU2-62P-201ENST00000410868 191 ntBASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 RNA5SP184-201ENST00000411071 108 ntBASIC2.86□□□□□ -1.95
CSNK1G3Q9Y6M4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms