Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AP000553.6-201ENST00000641242 118 ntBASIC3.45□□□□□ -1.86
PCDHGB3Q9Y5G1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGB3Q9Y5G1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHGB3Q9Y5G1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PCDHGB3Q9Y5G1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 MIR412-201ENST00000362142 91 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 RNU6-1287P-201ENST00000362914 107 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 RNU6-1060P-201ENST00000384664 107 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 RNA5SP171-201ENST00000391071 115 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 CISD1P1-201ENST00000393907 327 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 RPL5P18-201ENST00000406671 891 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 RNU6-1025P-201ENST00000410629 104 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 RNU4-46P-201ENST00000410818 138 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC063979.1-201ENST00000415539 377 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 DLGAP5P1-201ENST00000430307 464 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 MTND3P21-201ENST00000433774 331 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AL596276.1-201ENST00000434465 418 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AL451074.3-201ENST00000437709 472 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 SUMO2P6-201ENST00000505273 288 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 HMGN1P11-201ENST00000508668 303 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC104806.1-201ENST00000508720 308 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 SCARNA14-201ENST00000516903 136 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 FAM92A1P1-201ENST00000528023 890 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 MIR548AC-201ENST00000585049 88 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC007938.3-201ENST00000604965 623 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC008945.2-201ENST00000606056 604 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC017083.3-201ENST00000609955 700 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC019176.2-201ENST00000611579 315 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC013562.2-201ENST00000611632 603 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 AC073073.2-201ENST00000609827 2578 ntBASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGB3Q9Y5G1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 RNA5SP119-201ENST00000362715 117 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 RN7SKP226-201ENST00000364912 300 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 RNU6-658P-201ENST00000384606 106 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 U8.11-201ENST00000384699 133 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 U8.12-201ENST00000384701 133 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 Y_RNA.576-201ENST00000384781 102 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 MIR670-201ENST00000390142 98 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 RNU6-750P-201ENST00000390946 107 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 SNORA40C-201ENST00000391285 128 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 UBE2V1P2-201ENST00000397758 440 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 RPS4XP8-201ENST00000402039 771 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 RNU2-29P-201ENST00000410423 189 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 RNA5SP44-201ENST00000410446 133 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 OR6C66P-201ENST00000414917 930 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 OR2B8P-201ENST00000432841 938 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 MTND1P34-201ENST00000438556 671 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 DNAJC19P4-201ENST00000440115 345 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AL078601.1-201ENST00000444542 271 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 HMGN2P10-201ENST00000448085 265 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 U8.18-201ENST00000459285 133 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 RPS27P29-201ENST00000463110 252 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AC091153.1-201ENST00000466297 402 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 SEM1P1-201ENST00000506694 209 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 RNA5SP380-201ENST00000517190 98 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 MIR3944-201ENST00000581277 108 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 MTND4LP5-201ENST00000605152 292 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AL670379.4-201ENST00000605279 254 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 AC011155.2-201ENST00000623202 216 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 U6.99-201ENST00000637524 83 ntBASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGB3Q9Y5G1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms