Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PCDHGC4Q9Y5F7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGC4Q9Y5F7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGC4Q9Y5F7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGC4Q9Y5F7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGC4Q9Y5F7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGC4Q9Y5F7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGC4Q9Y5F7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGC4Q9Y5F7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PCDHGC4Q9Y5F7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGC4Q9Y5F7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 RNA5SP191-201ENST00000362585 102 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 Y_RNA.82-201ENST00000363000 102 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 Y_RNA.92-201ENST00000363043 102 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 RNU6-1167P-201ENST00000363227 94 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 Y_RNA.235-201ENST00000364412 102 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 Y_RNA.306-201ENST00000365015 102 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 Y_RNA.312-201ENST00000365089 102 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 Y_RNA.322-201ENST00000365151 102 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 RNU6-146P-201ENST00000384602 108 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 Y_RNA.650-201ENST00000459002 102 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 RN7SL517P-201ENST00000462240 305 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 Y_RNA.777-201ENST00000516982 102 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AC008694.2-201ENST00000517591 306 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 ATP5F1P5-201ENST00000526403 760 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AC084851.1-201ENST00000529105 249 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AC005476.1-201ENST00000554427 397 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AC060766.3-201ENST00000591442 263 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 Y_RNA.771-201ENST00000598668 102 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 Y_RNA.789-201ENST00000622480 102 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AC008785.1-201ENST00000624475 456 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 SAGE2P-201ENST00000420011 2126 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 ZNF826P-207ENST00000622273 1910 ntBASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGC4Q9Y5F7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGC4Q9Y5F7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
PCDHGC4Q9Y5F7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
PCDHGC4Q9Y5F7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.9□□□□□ -1.62
PCDHGC4Q9Y5F7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGC4Q9Y5F7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
PCDHGC4Q9Y5F7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 Y_RNA.418-201ENST00000384029 102 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 Y_RNA.497-201ENST00000384447 98 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 AL022722.2-201ENST00000402519 180 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 AC092017.2-201ENST00000427600 362 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 MTATP6P4-201ENST00000427725 675 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 AC016700.2-201ENST00000446011 156 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 snoU13.30-201ENST00000458951 104 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 snoU13.3-201ENST00000459441 104 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 AC104164.2-201ENST00000496953 495 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 RN7SKP234-201ENST00000517173 224 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 MIR4716-201ENST00000579628 84 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 SNORA74C-1-201ENST00000580726 201 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 AL161798.1-201ENST00000604630 131 ntBASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHGC4Q9Y5F7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 Y_RNA.308-201ENST00000365043 101 ntBASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 RNU6-514P-201ENST00000384208 107 ntBASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 AC006466.1-201ENST00000438721 289 ntBASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 AURKAPS2-201ENST00000454983 333 ntBASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 AP001025.1-201ENST00000486139 332 ntBASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 RN7SL558P-201ENST00000497468 299 ntBASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 Y_RNA.719-201ENST00000517156 106 ntBASIC4.89□□□□□ -1.63
PCDHGC4Q9Y5F7 RNU6-709P-201ENST00000517257 104 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms