Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AC092681.1-201ENST00000297369 291 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-527P-201ENST00000363425 104 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 snoU2_19.4-201ENST00000364329 80 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 Y_RNA.245-201ENST00000364493 95 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 RNA5SP30-201ENST00000365552 115 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-1199P-201ENST00000411249 104 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 RPS26P47-201ENST00000427219 348 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 HMGN2P27-201ENST00000427352 270 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 GEMIN8P3-201ENST00000445417 720 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 RN7SL583P-201ENST00000475692 287 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 RPS23P1-201ENST00000491662 432 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-155P-201ENST00000516347 100 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 RN7SKP234-201ENST00000517173 224 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AC021269.2-201ENST00000532318 330 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AL590392.1-201ENST00000604960 446 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AL138963.2-201ENST00000605137 226 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AL591926.4-201ENST00000616895 298 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 MIR8080-201ENST00000622224 89 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AP001340.1-201ENST00000624405 217 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 AL450326.2-201ENST00000421913 1962 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 OR4F13P-202ENST00000560066 2054 ntBASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHB3Q9Y5E6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 MIR223-201ENST00000385204 110 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-763P-201ENST00000390865 106 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 SNORA68.2-201ENST00000391263 128 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 AC005042.1-201ENST00000393397 800 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 AC009804.1-201ENST00000400949 179 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 MTHFD2P2-201ENST00000407725 247 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 NDUFB4P7-201ENST00000423198 363 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 AL589765.3-201ENST00000446084 462 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 ANP32BP2-201ENST00000454525 545 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 U8.19-201ENST00000459095 133 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-625P-201ENST00000459412 107 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 RN7SL515P-201ENST00000463999 297 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 COX6B1P2-201ENST00000489624 230 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 RN7SL547P-201ENST00000490793 290 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 Y_RNA.694-201ENST00000516677 117 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 AP001328.1-201ENST00000528550 176 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 AC109810.1-201ENST00000534066 224 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 U7.2-201ENST00000607576 63 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 AC027309.3-201ENST00000623419 351 ntBASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHB3Q9Y5E6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
PCDHB3Q9Y5E6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHB3Q9Y5E6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB3Q9Y5E6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB3Q9Y5E6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PCDHB3Q9Y5E6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHB3Q9Y5E6 C4BPAP1-201ENST00000415474 1893 ntBASIC5.39□□□□□ -1.55
PCDHB3Q9Y5E6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms