Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC005183.1-201ENST00000603687 1979 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 RNU6-1103P-201ENST00000384150 107 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 MIR1-2-201ENST00000384961 85 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 RNU4-55P-201ENST00000410731 137 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC114491.1-201ENST00000416095 246 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AL451054.2-201ENST00000420896 202 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC073464.1-201ENST00000429823 534 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 C8orf59P1-201ENST00000429930 303 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC002486.1-201ENST00000435098 391 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 RPS15AP9-201ENST00000439856 381 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC006539.3-201ENST00000454258 129 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 SRRM1P2-201ENST00000464531 1192 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 RPL23AP94-201ENST00000512518 302 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 RNU6-1256P-201ENST00000516539 103 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 RNU6-506P-201ENST00000516553 94 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 RNU6-1092P-201ENST00000516955 87 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AP006587.4-201ENST00000526053 529 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AL163153.1-201ENST00000554223 283 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 GTF3AP2-201ENST00000557014 266 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC034105.3-201ENST00000565294 442 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 MIR3186-201ENST00000577404 85 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 MIR4474-201ENST00000579189 78 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AL391646.1-201ENST00000603860 190 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC006023.1-201ENST00000603944 259 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 AC027514.1-201ENST00000588561 1603 ntBASIC3.11□□□□□ -1.91
YIPF1Q9Y548 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
YIPF1Q9Y548 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 Y_RNA.1-201ENST00000352915 104 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 Y_RNA.159-201ENST00000363674 87 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 RNU6-960P-201ENST00000364056 120 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 SMIM11P1-201ENST00000369586 178 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 Y_RNA.409-201ENST00000383990 98 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 SNORA18.3-201ENST00000384122 132 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 RNU6-74P-201ENST00000384235 107 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 RPS15AP6-201ENST00000420703 385 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 NDUFB4P7-201ENST00000423198 363 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 MTCO2P19-201ENST00000427513 598 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 OR2B8P-201ENST00000432841 938 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 HMGB3P12-201ENST00000438745 556 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 SSXP4-201ENST00000451349 245 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 RPS23P3-201ENST00000470993 430 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 RN7SL432P-201ENST00000484057 298 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 HIGD1AP13-201ENST00000509878 289 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 SCARNA15.2-201ENST00000516409 127 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 RNA5SP367-201ENST00000516557 118 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 RNU6-314P-201ENST00000516574 104 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 RN7SKP258-201ENST00000517151 304 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AP001804.3-201ENST00000525146 880 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AP003072.2-201ENST00000527756 676 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AC107016.2-201ENST00000547968 190 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AC124947.2-202ENST00000552735 133 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AP005205.1-201ENST00000563503 508 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 MIR4513-201ENST00000581077 86 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 MIR4672-201ENST00000583126 81 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AC009161.2-201ENST00000624626 138 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AC008568.2-201ENST00000623862 2313 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AC002546.1-201ENST00000588041 2504 ntBASIC3.1□□□□□ -1.91
YIPF1Q9Y548 AC096644.4-201ENST00000563417 2912 ntBASIC3.09□□□□□ -1.91
YIPF1Q9Y548 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
YIPF1Q9Y548 AL035425.3-201ENST00000564206 4996 ntBASIC3.09□□□□□ -1.91
YIPF1Q9Y548 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
YIPF1Q9Y548 AC073343.1-201ENST00000328239 651 ntBASIC3.09□□□□□ -1.91
YIPF1Q9Y548 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
YIPF1Q9Y548 SNORD56.3-201ENST00000363507 71 ntBASIC3.09□□□□□ -1.91
YIPF1Q9Y548 RNU6-1097P-201ENST00000363586 107 ntBASIC3.09□□□□□ -1.91
YIPF1Q9Y548 SNORA9.2-201ENST00000365361 133 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 204.7 ms