Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 MTND4P20-201ENST00000424125 869 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AL353777.1-201ENST00000425552 326 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 MTND5P25-201ENST00000430499 799 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AL365184.2-201ENST00000431139 435 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 TIMM9P1-201ENST00000436122 256 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AL512286.1-201ENST00000439244 400 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AL139824.2-201ENST00000458731 1095 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AC068587.2-201ENST00000478386 781 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AC008716.1-201ENST00000511084 513 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 RNA5SP148-201ENST00000516527 94 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 RNU6-64P-201ENST00000517119 105 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AL158211.1-201ENST00000566763 763 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AL161729.4-201ENST00000604650 476 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AC245517.5-201ENST00000611529 162 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AC007998.5-201ENST00000622938 237 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AP000770.2-201ENST00000623694 100 ntBASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAPPC4Q9Y296 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 RNU6-198P-201ENST00000384258 104 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 RNU6-193P-201ENST00000410977 107 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC244035.1-201ENST00000430042 390 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AL714022.1-201ENST00000439897 151 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 MTATP6P30-201ENST00000443540 664 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC108059.3-201ENST00000456388 214 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC116337.2-201ENST00000477662 156 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 RPS15AP34-201ENST00000487776 387 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC116347.2-201ENST00000514912 523 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 RNU6-927P-201ENST00000516199 100 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 IGLV3-17-201ENST00000519099 244 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 ATP5F1P5-201ENST00000526403 760 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC093012.1-202ENST00000549403 582 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC090616.3-201ENST00000582184 217 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC002545.1-201ENST00000592511 181 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 NRBF2P5-201ENST00000603087 788 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AL391813.2-201ENST00000609113 322 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC108747.1-201ENST00000609508 535 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC034102.8-201ENST00000615146 484 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC009159.1-201ENST00000618386 642 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC079416.3-201ENST00000624479 549 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 SCARNA15.3-201ENST00000626315 122 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 SCARNA4.1-201ENST00000628597 123 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 AC016717.2-201ENST00000609089 5141 ntBASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAPPC4Q9Y296 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 RNU5F-6P-201ENST00000362979 116 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 RNU6-1284P-201ENST00000363701 100 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 RNU6-553P-201ENST00000364047 96 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 MIR518C-201ENST00000384822 101 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 SNORD115.1-201ENST00000391109 76 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 RPS4XP7-201ENST00000406274 780 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 RNU4-72P-201ENST00000410754 173 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 RPL17P12-201ENST00000413391 526 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 AC099548.1-201ENST00000421443 426 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 WARS2P1-201ENST00000429678 537 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 RPL7P34-201ENST00000433316 712 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 AC118469.1-201ENST00000442943 488 ntBASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRAPPC4Q9Y296 AC013267.1-201ENST00000458227 267 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms