Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 AC004792.1-201ENST00000614523 137 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 AC127459.3-201ENST00000624328 466 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 BMS1P21-201ENST00000634565 365 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 AL049555.1-201ENST00000562834 1933 ntBASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.47□□□□□ -1.53
COL17A1Q9UMD9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 RNU6-28P-201ENST00000362378 107 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 RNU6-249P-201ENST00000363016 102 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 Y_RNA.373-201ENST00000365600 103 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 Y_RNA.461-201ENST00000384263 103 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 MT-TW-201ENST00000387382 68 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 AL356421.1-201ENST00000403255 413 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 RN7SKP158-201ENST00000410453 326 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 EIF1P2-201ENST00000428233 350 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 MTND3P16-201ENST00000452205 344 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 GSTA11P-201ENST00000452866 669 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 RNU6-111P-201ENST00000517179 105 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 RNU6-89P-201ENST00000606519 100 ntBASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
COL17A1Q9UMD9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.46□□□□□ -1.54
COL17A1Q9UMD9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL17A1Q9UMD9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL17A1Q9UMD9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL17A1Q9UMD9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL17A1Q9UMD9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COL17A1Q9UMD9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL17A1Q9UMD9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.14-201ENST00000362415 103 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.100-201ENST00000363141 102 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.464-201ENST00000384282 110 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 MIR513A2-201ENST00000385249 127 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 MIR1261-201ENST00000408659 82 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 MTCO3P29-201ENST00000432119 779 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AL354710.1-201ENST00000453641 246 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 RNU6-1218P-201ENST00000458990 108 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 FAM206BP-201ENST00000510179 541 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 RNU6-1088P-201ENST00000516850 104 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 RNU6-1213P-201ENST00000517075 94 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 IGKV2-26-201ENST00000518305 343 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AL355596.1-201ENST00000565399 3996 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.252-201ENST00000364556 101 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.463-201ENST00000384271 102 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 RNU6-310P-201ENST00000384655 107 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 PCNPP3-201ENST00000393579 471 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AC078974.1-201ENST00000411597 223 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 ERLEC1P1-201ENST00000433806 578 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 snoU109.6-201ENST00000516831 118 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 RNU6-410P-201ENST00000517006 107 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AP003497.1-201ENST00000528472 562 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AP000907.2-201ENST00000530827 353 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 SETP2-201ENST00000553886 926 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 LARP7P2-201ENST00000575306 125 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AC010620.2-201ENST00000600135 313 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 RPL23AP92-201ENST00000603609 255 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 MTND4LP5-201ENST00000605152 292 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AC004832.4-201ENST00000608952 331 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 MIR7851-201ENST00000610611 160 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AC133104.2-201ENST00000615272 193 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AC091953.2-201ENST00000623979 160 ntBASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.45□□□□□ -1.54
COL17A1Q9UMD9 AC006020.1-201ENST00000420179 1854 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms