Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTN3Q9P232 Y_RNA.471-201ENST00000384312 102 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 U3.42-201ENST00000408746 214 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 NDUFB1P2-201ENST00000449477 176 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 TRBVB-201ENST00000477100 408 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 AC025465.3-201ENST00000510570 311 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 RNU6-397P-201ENST00000516226 104 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 RNA5SP471-201ENST00000516971 106 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 MIR4277-201ENST00000578298 84 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 SNRPGP15-201ENST00000600149 222 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 SDR42E1P4-201ENST00000620894 481 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTN3Q9P232 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
CNTN3Q9P232 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTN3Q9P232 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTN3Q9P232 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNTN3Q9P232 MTND5P9-201ENST00000503854 1755 ntBASIC4.91□□□□□ -1.62
CNTN3Q9P232 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNTN3Q9P232 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.9□□□□□ -1.62
CNTN3Q9P232 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CNTN3Q9P232 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CNTN3Q9P232 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CNTN3Q9P232 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CNTN3Q9P232 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CNTN3Q9P232 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CNTN3Q9P232 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CNTN3Q9P232 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNTN3Q9P232 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNTN3Q9P232 DEFB108F-201ENST00000344638 222 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 RNU6-212P-201ENST00000362642 104 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 RNU6-200P-201ENST00000364743 107 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 Y_RNA.477-201ENST00000384352 108 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CNTN3Q9P232 LAP3P1-201ENST00000403648 294 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 AL356387.2-201ENST00000422272 243 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 AL158156.1-201ENST00000422509 473 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 RPL21P91-201ENST00000429231 479 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 AC092573.2-201ENST00000434546 243 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 RNA5SP360-201ENST00000516555 118 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 Y_RNA.700-201ENST00000516806 100 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.9□□□□□ -1.63
CNTN3Q9P232 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.9□□□□□ -1.63
CNTN3Q9P232 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.9□□□□□ -1.63
CNTN3Q9P232 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.9□□□□□ -1.63
CNTN3Q9P232 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.9□□□□□ -1.63
CNTN3Q9P232 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.9□□□□□ -1.63
CNTN3Q9P232 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.9□□□□□ -1.63
CNTN3Q9P232 AL355877.2-201ENST00000603670 358 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 AL161798.1-201ENST00000604630 131 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 MIR8076-201ENST00000611401 83 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 AC243829.7-201ENST00000633081 225 ntBASIC4.9□□□□□ -1.63
CNTN3Q9P232 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.9□□□□□ -1.63
CNTN3Q9P232 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTN3Q9P232 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTN3Q9P232 OR51H2P-202ENST00000641424 3046 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTN3Q9P232 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTN3Q9P232 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTN3Q9P232 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTN3Q9P232 RNU1-76P-201ENST00000362903 159 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 RNA5SP235-201ENST00000365411 114 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 MIR521-1-201ENST00000384902 87 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 MIR548H3-201ENST00000408771 118 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 Y_RNA.592-201ENST00000410274 109 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 RNU6-1025P-201ENST00000410629 104 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 RPS26P2-201ENST00000440331 348 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 LINC01399-202ENST00000458450 244 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 RPL21P126-201ENST00000470049 478 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 RPL30P10-201ENST00000488148 337 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 AC015795.1-201ENST00000513669 327 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 Vault.1-201ENST00000516474 102 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 IGKV2D-23-201ENST00000518179 286 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 ATP5F1P5-201ENST00000526403 760 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 AC084851.1-201ENST00000529105 249 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTN3Q9P232 LINC00901.1-201ENST00000617252 152 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.89□□□□□ -1.63
CNTN3Q9P232 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.89□□□□□ -1.63
CNTN3Q9P232 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTN3Q9P232 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms