Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 AC104058.1-201ENST00000448028 297 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.68□□□□□ -1.82
EHD3Q9NZN3 VN1R17P-201ENST00000472048 1090 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 MTCO1P29-201ENST00000496868 288 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.68□□□□□ -1.82
EHD3Q9NZN3 TBCAP3-201ENST00000512475 312 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 RNU6-189P-201ENST00000516120 101 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 RN7SKP60-201ENST00000516985 239 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 SNORA25.17-201ENST00000517184 124 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 AL442663.2-201ENST00000554385 511 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 AC090877.1-201ENST00000561418 344 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.68□□□□□ -1.82
EHD3Q9NZN3 AC106782.4-201ENST00000568264 210 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.68□□□□□ -1.82
EHD3Q9NZN3 AC104763.2-201ENST00000604179 382 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.68□□□□□ -1.82
EHD3Q9NZN3 AL365204.3-201ENST00000612448 685 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 RNA5SP196-201ENST00000625967 102 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.68□□□□□ -1.82
EHD3Q9NZN3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.68□□□□□ -1.82
EHD3Q9NZN3 AC005183.1-201ENST00000603687 1979 ntBASIC3.68□□□□□ -1.82
EHD3Q9NZN3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
EHD3Q9NZN3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
EHD3Q9NZN3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
EHD3Q9NZN3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 RNA5SP295-201ENST00000362655 121 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 RNA5SP235-201ENST00000365411 114 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 SNORD116-29-201ENST00000384516 83 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 Y_RNA.579-201ENST00000390939 94 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 SNORA16.2-201ENST00000390991 127 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 AL353729.1-201ENST00000425044 720 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 DYNLL1P5-201ENST00000467158 270 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 RNU6-256P-201ENST00000516747 97 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 RNU6-352P-201ENST00000516908 107 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 AC093249.1-201ENST00000567049 203 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 MIR3672-201ENST00000584290 82 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 AL627309.6-201ENST00000606857 840 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 AC009570.1-201ENST00000609599 745 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 Y_RNA.812-201ENST00000610788 101 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 Y_RNA.784-201ENST00000613803 101 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 Y_RNA.787-201ENST00000616522 101 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 Y_RNA.780-201ENST00000617336 101 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 MIR6875-201ENST00000617506 72 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 Y_RNA.801-201ENST00000619005 101 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
EHD3Q9NZN3 AC009812.4-201ENST00000569134 1805 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 AC007256.1-201ENST00000392253 2765 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.67□□□□□ -1.82
EHD3Q9NZN3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 RNU6-254P-201ENST00000363377 107 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 RNA5SP515-201ENST00000364570 118 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 RNA5SP97-201ENST00000365006 84 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 RNU6-715P-201ENST00000365204 103 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 SNORA36C-201ENST00000384289 132 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 EIF4E2P1-201ENST00000393781 255 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 AL590004.1-201ENST00000405321 300 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 MIR548K-201ENST00000408406 116 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 VN1R36P-201ENST00000414936 291 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 AC244098.2-201ENST00000422068 99 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 HSFY6P-201ENST00000445573 403 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 HMGB3P8-201ENST00000449709 577 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 AC012181.1-201ENST00000479895 423 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 KLHL2P1-201ENST00000508691 521 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 RNA5SP164-201ENST00000516533 110 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 RNU6-566P-201ENST00000516790 107 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 RNU6-677P-201ENST00000516914 101 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 RN7SKP258-201ENST00000517151 304 ntBASIC3.66□□□□□ -1.82
EHD3Q9NZN3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.66□□□□□ -1.82
EHD3Q9NZN3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms