Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 PPP1R11P2-201ENST00000423543 382 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC244505.4-201ENST00000434905 287 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC016691.1-201ENST00000441321 413 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 MTCO3P45-201ENST00000443036 613 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 SSXP5-201ENST00000443473 287 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC010631.1-201ENST00000474150 156 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC233702.1-201ENST00000482905 502 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 RNA5SP401-201ENST00000515920 127 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-835P-201ENST00000516974 104 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AP001646.1-201ENST00000527936 915 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AF038458.1-201ENST00000588406 262 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AL162413.1-201ENST00000603198 110 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AL020991.1-201ENST00000612314 373 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC022306.2-201ENST00000617563 647 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AL354950.2-201ENST00000617939 290 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 U6.42-201ENST00000618440 107 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 MIR7975-201ENST00000619350 68 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 YWHAEP7-203ENST00000622054 312 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC093648.1-201ENST00000623546 606 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC005609.4-201ENST00000625071 447 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 MIR3662-201ENST00000637030 95 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AL049781.1-201ENST00000623195 3585 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 CASC19-280ENST00000642102 1351 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 SNORA23-201ENST00000365128 182 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 SNORD67-201ENST00000390833 111 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AC114491.1-201ENST00000416095 246 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AL139413.1-201ENST00000421309 217 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AC018630.2-202ENST00000422992 927 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 MED13P1-201ENST00000428342 171 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 RPL23AP69-201ENST00000431134 458 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 CACYBPP2-201ENST00000453625 678 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AC022364.2-201ENST00000457963 554 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 RNU7-63P-201ENST00000459054 62 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 RPS29P25-201ENST00000481709 171 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 SNORA31.22-201ENST00000517204 135 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 HIF1AP1-201ENST00000553642 175 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 TRAV37-201ENST00000553906 342 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AL121579.1-201ENST00000555129 305 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AP001029.3-201ENST00000588063 596 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 AL390240.1-201ENST00000612950 384 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 FER-210ENST00000628534 558 ntTSL 5 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.24□□□□□ -1.89
SMARCAL1Q9NZC9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC002546.1-201ENST00000588041 2504 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 SNORA62.1-201ENST00000364287 154 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 RNU5E-4P-201ENST00000364931 120 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 DEFB109C-201ENST00000382575 264 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 DEFB109B-201ENST00000382656 264 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 RNA5SP171-201ENST00000391071 115 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-876P-201ENST00000391295 104 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 RNU2-39P-201ENST00000410604 198 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-1068P-201ENST00000410958 103 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC024082.2-201ENST00000434771 238 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AL358232.1-201ENST00000448030 501 ntBASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.23□□□□□ -1.89
SMARCAL1Q9NZC9 AC010285.1-201ENST00000470580 392 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms