Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6-338P-201ENST00000383888 105 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6-1032P-201ENST00000384100 107 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 SNORA67.3-201ENST00000384366 140 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 MIR27B-201ENST00000385129 97 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 U3.22-201ENST00000391120 215 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AL603865.2-201ENST00000401679 213 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6ATAC-201ENST00000408749 126 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 RNA5SP425-201ENST00000410336 112 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 RPL21P24-201ENST00000413752 448 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AL449283.1-202ENST00000418249 604 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 RPL30P13-201ENST00000418873 348 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 HMGN2P3-201ENST00000433603 273 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 HMGN2P5-201ENST00000436882 273 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 BRK1P2-201ENST00000442875 223 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 RPS3P1-201ENST00000456781 192 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 FCF1P6-201ENST00000456841 595 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC006512.1-201ENST00000468816 291 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 PRELID3BP5-201ENST00000508612 460 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6-390P-201ENST00000516259 103 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 DUXAP5-201ENST00000529668 529 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 PSMA3P-201ENST00000555485 635 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC025884.1-201ENST00000556034 378 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 MIR4419B-201ENST00000577260 68 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC026271.5-201ENST00000577873 130 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 MIR3939-201ENST00000582614 106 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC021646.1-201ENST00000605469 484 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6-91P-201ENST00000607774 107 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC034229.4-201ENST00000607861 441 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC068880.4-201ENST00000623082 495 ntBASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.92□□□□□ -2.26
CDC42SE1Q9NRR8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 MTCO1P12-201ENST00000414273 1543 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 RNU1-62P-201ENST00000362599 164 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 RNU1-57P-201ENST00000384491 166 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6-14P-201ENST00000384630 106 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 MIR9-1-201ENST00000385198 89 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 RNA5SP465-201ENST00000391195 109 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AL133475.1-201ENST00000404414 305 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 RPS4XP9-201ENST00000405151 780 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 MIR1262-201ENST00000408276 93 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 MRPS36P1-201ENST00000421291 307 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC008267.5-201ENST00000424928 265 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AL590762.4-201ENST00000425885 253 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 RPL17P35-201ENST00000432217 549 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 FCF1P1-201ENST00000432690 571 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 NDUFA12P1-201ENST00000455914 406 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 HMGN2P23-201ENST00000456759 269 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC104563.1-201ENST00000476147 376 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC104109.1-201ENST00000498563 436 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AK6-203ENST00000502819 743 ntTSL 5 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC104090.1-201ENST00000506341 1171 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC008885.1-201ENST00000514930 301 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 RNA5SP473-201ENST00000516402 125 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 MIR2116-201ENST00000517221 80 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC009902.1-201ENST00000519351 183 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 MTCYBP20-201ENST00000524239 1129 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AP005597.4-201ENST00000526762 229 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC021269.2-201ENST00000532318 330 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC093012.1-202ENST00000549403 582 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 IMMP1LP2-201ENST00000552954 492 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms