Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 PRDX3P3-201ENST00000447765 522 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 RN7SL323P-201ENST00000494712 295 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 PPBPP1-201ENST00000510807 373 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 RNU6-352P-201ENST00000516908 107 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 RNU1-54P-201ENST00000517181 120 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 RNU6-323P-201ENST00000521915 107 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 IGKV2D-19-201ENST00000523346 262 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 CYCSP30-201ENST00000546447 172 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 CYP4A43P-201ENST00000568156 121 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 MTND6P33-201ENST00000571794 183 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 RPL23AP87-202ENST00000573039 466 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 MIR6868-201ENST00000611215 58 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AC004696.1-201ENST00000614345 607 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AC007998.5-201ENST00000622938 237 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AC243312.2-201ENST00000623340 601 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 RNU6-1249P-201ENST00000363237 111 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 SNORA75.6-201ENST00000391318 127 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 RPL21P17-201ENST00000397467 475 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 RN7SKP177-201ENST00000410567 355 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 SYF2P2-201ENST00000417620 583 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC099677.1-201ENST00000420575 175 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AL669831.1-202ENST00000428504 417 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC096644.2-201ENST00000429278 159 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 CBX3P6-201ENST00000430257 527 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC236972.1-201ENST00000433225 199 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 HIGD1AP11-201ENST00000438361 280 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AL451050.1-201ENST00000450126 415 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 RN7SL585P-201ENST00000470538 280 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 RPL7P23-201ENST00000493874 747 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC015911.1-201ENST00000495111 156 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC023141.12-201ENST00000512399 199 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC026801.2-201ENST00000515352 425 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 RNU6-390P-201ENST00000516259 103 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 Y_RNA.689-201ENST00000516589 107 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AL161670.1-201ENST00000554348 137 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC087499.8-201ENST00000578406 226 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC011471.1-201ENST00000585766 187 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AC018462.2-201ENST00000605375 395 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 LINC00901.1-201ENST00000617252 152 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 AL365440.1-201ENST00000436135 2167 ntBASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PDLIM7Q9NR12 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 CDC27P3-201ENST00000635418 1910 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 MARK2P15-201ENST00000432204 2186 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 SNORA60-201ENST00000362396 134 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 Y_RNA.176-201ENST00000363815 109 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 RNA5SP72-201ENST00000364442 117 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 RNU6-702P-201ENST00000364982 107 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 RNA5SP167-201ENST00000365461 116 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 NDUFB4P4-201ENST00000404822 243 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 RNA5SP146-201ENST00000410743 123 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 Y_RNA.618-201ENST00000410949 107 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 RPL23AP69-201ENST00000431134 458 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 USP9YP7-201ENST00000436723 430 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 USP9YP32-201ENST00000452432 430 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 GSTA11P-201ENST00000452866 669 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AC087884.1-201ENST00000469738 328 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AC128713.1-201ENST00000471495 306 ntBASIC4.49□□□□□ -1.69
PDLIM7Q9NR12 AC006517.1-201ENST00000480485 328 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms