Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 RPL21P17-201ENST00000397467 475 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 RNU6-1025P-201ENST00000410629 104 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 RNA5SP38-201ENST00000410750 119 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 RNU6-193P-201ENST00000410977 107 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 AL158156.1-201ENST00000422509 473 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 RPL31P12-201ENST00000422587 358 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 AC007389.2-201ENST00000434630 306 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 AC006539.3-201ENST00000454258 129 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 AC012181.1-201ENST00000479895 423 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 TRBV12-2-201ENST00000489763 344 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 BNIP3P6-201ENST00000549284 499 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 AL157871.3-201ENST00000557231 293 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 HMGB1P14-201ENST00000557424 591 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 MIR1273C-201ENST00000578669 77 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 MIR5692A1-201ENST00000580523 69 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 MIR548AC-201ENST00000585049 88 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 AC010525.2-201ENST00000590920 195 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 FTX_3.1-201ENST00000610451 147 ntBASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
NECTIN3Q9NQS3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AC118273.1-201ENST00000525324 3006 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 Y_RNA.33-201ENST00000362591 102 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 RPL23AP82-202ENST00000427528 469 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 MTND3P16-201ENST00000452205 344 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 SCARNA18-201ENST00000459004 134 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 RNU7-180P-201ENST00000459240 63 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 RNU7-170P-201ENST00000459303 61 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 RPL21P41-201ENST00000459863 264 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AP003122.3-201ENST00000526316 255 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AC084851.1-201ENST00000529105 249 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 MIR5187-201ENST00000583479 76 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 RNU1-30P-201ENST00000606575 163 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AL020991.1-201ENST00000612314 373 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 AC024614.3-201ENST00000637860 256 ntBASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NECTIN3Q9NQS3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 RNU6-283P-201ENST00000364788 107 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 RNU6-715P-201ENST00000365204 103 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 RNU6-395P-201ENST00000365662 106 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 SNORD70.1-201ENST00000391007 85 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 RPL21P90-201ENST00000415692 466 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 AC017083.1-201ENST00000428093 483 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 NEK4P1-201ENST00000433383 879 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 CALM1P1-201ENST00000442082 433 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 AC008264.1-201ENST00000447612 367 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 snoU13.28-201ENST00000459235 104 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 RPL21P99-201ENST00000480369 423 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 AC139453.3-201ENST00000493276 369 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 AMZ2P1-203ENST00000565833 850 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 MIR5583-1-201ENST00000580941 59 ntBASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.51□□□□□ -1.85
NECTIN3Q9NQS3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms