Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL513477.1-202ENST00000417061 214 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.78□□□□□ -1.96
UBQLN3Q9H347 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
UBQLN3Q9H347 RPL36AP53-201ENST00000432891 316 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 HMGB3P12-201ENST00000438745 556 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 GAPDHP17-201ENST00000449858 1001 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 MTND1P27-201ENST00000451117 902 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 RPL31P3-201ENST00000458430 332 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 RNU6-956P-201ENST00000458868 103 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 RNU6-953P-201ENST00000459154 107 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.78□□□□□ -1.96
UBQLN3Q9H347 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.78□□□□□ -1.96
UBQLN3Q9H347 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.78□□□□□ -1.96
UBQLN3Q9H347 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.78□□□□□ -1.96
UBQLN3Q9H347 AC010653.1-201ENST00000571108 881 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 AC005498.1-201ENST00000592125 465 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 AC119751.7-201ENST00000600494 245 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 AC007998.5-201ENST00000622938 237 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 PISRT1-201ENST00000626175 531 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 AC084035.1-201ENST00000634543 607 ntBASIC2.78□□□□□ -1.96
UBQLN3Q9H347 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
UBQLN3Q9H347 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
UBQLN3Q9H347 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
UBQLN3Q9H347 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.78□□□□□ -1.97
UBQLN3Q9H347 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 MIR22-201ENST00000362190 85 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 RNU6-960P-201ENST00000364056 120 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 SNORA71.1-201ENST00000364523 117 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 RNU6-946P-201ENST00000383878 107 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 UBA52P6-201ENST00000399822 382 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 RNU2-68P-201ENST00000410878 191 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 RPS12P24-201ENST00000412619 387 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 RPL7P37-201ENST00000425095 738 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC009414.1-201ENST00000427200 443 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 SETP8-201ENST00000435341 628 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 MTCO2P16-201ENST00000436962 677 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 MTATP6P26-201ENST00000445926 662 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 NANOGNBP1-201ENST00000448444 480 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC093899.1-201ENST00000457984 376 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 RN7SL633P-201ENST00000488974 297 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 RPS29P20-201ENST00000489592 171 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 Vault.3-201ENST00000516676 95 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 RNU6-143P-201ENST00000516942 93 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC022616.3-201ENST00000523940 148 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AL391261.3-201ENST00000557194 520 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 HMGN2P15-201ENST00000585707 270 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC011471.1-201ENST00000585766 187 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AL355877.2-201ENST00000603670 358 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AL358072.1-201ENST00000604156 575 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC090578.1-201ENST00000604955 591 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AP002360.4-201ENST00000606980 481 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC093732.2-201ENST00000607950 274 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AC135507.2-201ENST00000612443 309 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 AL355596.1-201ENST00000565399 3996 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
UBQLN3Q9H347 FARSBP1-201ENST00000435808 1778 ntBASIC2.77□□□□□ -1.97
UBQLN3Q9H347 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AC073343.1-201ENST00000328239 651 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 Y_RNA.77-201ENST00000362962 107 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 SNORD116-9-201ENST00000384000 95 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 SNORD116-3-201ENST00000384287 95 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 SNORD116-1-201ENST00000384335 95 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 SNORD116-7-201ENST00000384404 95 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 SNORD116-5-201ENST00000384462 95 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 SNORA44-201ENST00000384584 132 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 RNU6-817P-201ENST00000391083 104 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 BX295541.1-201ENST00000417774 250 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AL592045.1-201ENST00000429867 352 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.76□□□□□ -1.97
UBQLN3Q9H347 RPS24P1-201ENST00000438550 371 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AC073614.1-201ENST00000438690 650 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AC009296.1-201ENST00000443146 155 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 AC244505.5-201ENST00000443639 207 ntBASIC2.76□□□□□ -1.97
UBQLN3Q9H347 USP9YP29-201ENST00000445112 563 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms