Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 HIGD1AP15-201ENST00000416198 280 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 COTL1P1-201ENST00000422309 375 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 AC022616.6-201ENST00000520479 119 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 MTND4LP18-201ENST00000526864 291 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 AC010186.2-204ENST00000537668 439 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 AL121821.2-201ENST00000556081 394 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 LARP7P3-201ENST00000579888 337 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 ELOCP29-201ENST00000588193 334 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 AL021997.1-201ENST00000605757 193 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 RNU6-91P-201ENST00000607774 107 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 MIR6134-201ENST00000617606 109 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 CDC27P3-201ENST00000635418 1910 ntBASIC3.76□□□□□ -1.81
CHMP4AQ9BY43 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AL109809.4-201ENST00000603520 2185 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 FABP5P14-201ENST00000437273 393 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AC009961.3-201ENST00000449832 765 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AC117503.1-201ENST00000472241 394 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 MTND1P3-201ENST00000484956 952 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AC018437.1-201ENST00000492214 406 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 MIR892C-201ENST00000516410 77 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 RN7SKP265-201ENST00000516448 223 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 RNU6-1183P-201ENST00000517054 60 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AC009097.3-201ENST00000563557 1018 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 MIR5571-201ENST00000577998 113 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AC105245.1-201ENST00000581934 244 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AC234772.3-201ENST00000602277 528 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 MTCYBP22-201ENST00000603788 447 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 BX664608.1-201ENST00000610519 487 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AC010338.1-201ENST00000621823 717 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AC244517.12-201ENST00000623581 663 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 AC093591.3-201ENST00000634516 308 ntBASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHMP4AQ9BY43 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 AC009487.2-201ENST00000420969 6821 ntBASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 RNU5E-6P-201ENST00000365574 115 ntBASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 RNU6-14P-201ENST00000384630 106 ntBASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 RNU6-220P-201ENST00000390919 107 ntBASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 AL139132.1-201ENST00000431587 344 ntBASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 MRPL42P6-201ENST00000486397 371 ntBASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 RNU7-51P-201ENST00000516560 62 ntBASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 MTND1P24-201ENST00000552175 861 ntBASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 AC007363.1-201ENST00000604736 620 ntBASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 LRRC77P-213ENST00000637727 880 ntBASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHMP4AQ9BY43 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 AC104454.1-201ENST00000421341 1401 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 RNU6-500P-201ENST00000362349 107 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 RNU6-188P-201ENST00000364207 107 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 RNU6-190P-201ENST00000384154 102 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 RNU6-1072P-201ENST00000384703 107 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 RNU6-443P-201ENST00000384780 107 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 OR6C5P-201ENST00000452388 923 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 AC080014.1-201ENST00000496877 1201 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 RNA5SP367-201ENST00000516557 118 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 AC091489.2-201ENST00000566263 604 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 AL589994.2-201ENST00000621124 579 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 AC131280.1-202ENST00000624067 4211 ntBASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CHMP4AQ9BY43 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHMP4AQ9BY43 AC073343.1-201ENST00000328239 651 ntBASIC3.72□□□□□ -1.81
CHMP4AQ9BY43 MIR634-201ENST00000385208 97 ntBASIC3.72□□□□□ -1.81
CHMP4AQ9BY43 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.72□□□□□ -1.81
CHMP4AQ9BY43 RPS3AP44-201ENST00000425466 790 ntBASIC3.72□□□□□ -1.81
CHMP4AQ9BY43 AL592045.1-201ENST00000429867 352 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms