Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC005086.4-201ENST00000623065 213 ntBASIC4.23□□□□□ -1.73
PTCHD1Q96NR3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.23□□□□□ -1.73
PTCHD1Q96NR3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD1Q96NR3 CPHL1P-201ENST00000461341 3407 ntBASIC4.23□□□□□ -1.73
PTCHD1Q96NR3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCHD1Q96NR3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 RNY1P16-201ENST00000363063 111 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 RNU6-379P-201ENST00000363813 104 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 Y_RNA.210-201ENST00000364161 110 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 RNU6-1025P-201ENST00000410629 104 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 AC016397.1-201ENST00000412463 242 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 RPL23AP25-201ENST00000430973 463 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 RPS15AP10-201ENST00000432472 382 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 RPL21P2-201ENST00000440049 481 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 Z98949.2-201ENST00000440996 144 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 OSTCP8-201ENST00000445117 448 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 PCNPP5-201ENST00000452246 481 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 AL645939.1-201ENST00000453429 797 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 HMGN1P11-201ENST00000508668 303 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 AC015795.1-201ENST00000513669 327 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 SNORA40.14-201ENST00000516543 86 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 IGKV2D-23-201ENST00000518179 286 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 AC084851.1-201ENST00000529105 249 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 MIR5188-201ENST00000583467 113 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 MIR5096-201ENST00000583713 70 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 BPIFA4P-203ENST00000603168 689 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 AL121917.1-203ENST00000605534 577 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 AL023881.1-201ENST00000621088 301 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 FP236240.3-201ENST00000623061 327 ntBASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.22□□□□□ -1.73
PTCHD1Q96NR3 ZNF72P-201ENST00000425869 1908 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 RNA5SP28-201ENST00000363841 119 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 RNU4-42P-201ENST00000364738 142 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 Y_RNA.307-201ENST00000365022 117 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 MIR921-201ENST00000401133 56 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 AL513475.1-201ENST00000406602 315 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 AL096701.2-201ENST00000416920 238 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 AL356387.2-201ENST00000422272 243 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 AC011998.1-201ENST00000433403 117 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 FO393415.2-201ENST00000480085 343 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 AC104564.1-201ENST00000493028 407 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 RNA5SP497-201ENST00000516081 97 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 RNU7-4P-201ENST00000516961 62 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 Y_RNA.715-201ENST00000517082 110 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 HIGD1AP5-201ENST00000529959 259 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 CPDP1-201ENST00000579660 283 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 AC091905.2-201ENST00000623143 306 ntBASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTCHD1Q96NR3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 RNU6-874P-201ENST00000362390 105 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 U3.22-201ENST00000391120 215 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 TMSB10P2-201ENST00000416049 131 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 RPL21P91-201ENST00000429231 479 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 DYNLT3P2-201ENST00000442517 295 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms