Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.45□□□□□ -2.02
USP47Q96K76 AC021749.1-201ENST00000604322 607 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 AL359821.1-201ENST00000605519 182 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 AL161734.1-201ENST00000609720 557 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.45□□□□□ -2.02
USP47Q96K76 AC091953.2-201ENST00000623979 160 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 AL138960.2-201ENST00000625145 535 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 LINC02211-204ENST00000642024 1070 ntBASIC2.45□□□□□ -2.02
USP47Q96K76 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.45□□□□□ -2.02
USP47Q96K76 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.45□□□□□ -2.02
USP47Q96K76 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
USP47Q96K76 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.44□□□□□ -2.02
USP47Q96K76 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USP47Q96K76 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USP47Q96K76 RNY1P10-201ENST00000363268 113 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 RNU6-359P-201ENST00000365466 108 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USP47Q96K76 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USP47Q96K76 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.44□□□□□ -2.02
USP47Q96K76 AL645568.3-201ENST00000433683 316 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 BNIP3P2-201ENST00000441221 577 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 MTCO2P25-201ENST00000447065 681 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 RPS15AP27-201ENST00000449183 343 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 MTND1P31-201ENST00000449206 961 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 AP1S2P1-201ENST00000457344 379 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 AL163540.1-201ENST00000485382 386 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.44□□□□□ -2.02
USP47Q96K76 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.44□□□□□ -2.02
USP47Q96K76 RNU6-840P-201ENST00000517275 65 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 AC091163.3-201ENST00000518269 1144 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
USP47Q96K76 AC010376.1-201ENST00000522101 334 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.44□□□□□ -2.02
USP47Q96K76 AL353997.4-201ENST00000586196 166 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 AC024560.3-201ENST00000608482 349 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 AL512643.1-201ENST00000635735 524 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 AC013437.2-201ENST00000639587 677 ntBASIC2.44□□□□□ -2.02
USP47Q96K76 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
USP47Q96K76 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
USP47Q96K76 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
USP47Q96K76 RNU6-560P-201ENST00000364007 108 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 Y_RNA.269-201ENST00000364685 89 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 SNORA23-201ENST00000365128 182 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 RNU4-62P-201ENST00000410125 130 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.43□□□□□ -2.02
USP47Q96K76 AC007919.1-201ENST00000429380 217 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 AC087588.1-201ENST00000462203 316 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 AC138853.1-201ENST00000503549 823 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 AC108078.2-201ENST00000510750 236 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 AC117532.1-201ENST00000514638 323 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.43□□□□□ -2.02
USP47Q96K76 AP003497.1-201ENST00000528472 562 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
USP47Q96K76 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.43□□□□□ -2.02
USP47Q96K76 BNIP3P31-201ENST00000604515 566 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 MIR8081-201ENST00000611533 95 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 PART1_2.1-201ENST00000612397 250 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.43□□□□□ -2.02
USP47Q96K76 MIR4275-201ENST00000636486 87 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 AP003399.1-201ENST00000637534 361 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 AL390862.1-201ENST00000635467 1469 ntBASIC2.43□□□□□ -2.02
USP47Q96K76 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
USP47Q96K76 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.43□□□□□ -2.02
USP47Q96K76 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
USP47Q96K76 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USP47Q96K76 CR848007.1-201ENST00000442354 1699 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 Y_RNA.118-201ENST00000363300 101 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 RNU1-39P-201ENST00000383897 165 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 Y_RNA.508-201ENST00000384502 114 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 RNU6-114P-201ENST00000384704 105 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 U3.20-201ENST00000390909 217 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 AL356421.1-201ENST00000403255 413 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.42□□□□□ -2.02
USP47Q96K76 AP1B1P2-201ENST00000416196 106 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.42□□□□□ -2.02
USP47Q96K76 PIGFP3-201ENST00000441918 722 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 TPT1P14-201ENST00000448018 505 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 ATG12P2-201ENST00000456830 416 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 AC005840.1-201ENST00000498412 377 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.42□□□□□ -2.02
USP47Q96K76 AC007375.1-201ENST00000554513 578 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 TRAV28-201ENST00000557548 323 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 AC005498.1-201ENST00000592125 465 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.42□□□□□ -2.02
USP47Q96K76 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.42□□□□□ -2.02
USP47Q96K76 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.42□□□□□ -2.02
USP47Q96K76 AC013476.2-201ENST00000614456 459 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
USP47Q96K76 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.42□□□□□ -2.02
USP47Q96K76 WWP1P1-201ENST00000466609 2769 ntBASIC2.42□□□□□ -2.02
USP47Q96K76 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP47Q96K76 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP47Q96K76 AL109755.1-201ENST00000401791 649 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 AL021407.1-201ENST00000404531 386 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 RNU6-516P-201ENST00000411381 104 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 TPMTP3-201ENST00000411928 735 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 AL358075.3-201ENST00000426289 226 ntBASIC2.41□□□□□ -2.02
USP47Q96K76 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms