Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 Y_RNA.157-201ENST00000363638 102 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 Y_RNA.231-201ENST00000364358 102 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 RNU4-66P-201ENST00000365199 138 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 RNU6-116P-201ENST00000384042 109 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 MIR514A2-201ENST00000385131 88 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 MIR514A3-201ENST00000385132 88 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 MIR514A1-201ENST00000385133 98 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 AL391417.1-201ENST00000404100 426 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 RNU6-373P-201ENST00000411247 98 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 AL451054.2-201ENST00000420896 202 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 AC091390.3-201ENST00000426478 338 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 SSXP4-201ENST00000451349 245 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 HMGN2P26-201ENST00000463169 339 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 RPL21P99-201ENST00000480369 423 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 LRRC34P2-201ENST00000514850 553 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 SNORA31.3-201ENST00000516029 96 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 YPEL5P3-201ENST00000547227 352 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 MIR4429-201ENST00000580105 73 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 BNIP3P22-201ENST00000593399 556 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 BDH2P1-201ENST00000602288 736 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 AL670379.4-201ENST00000605279 254 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 AL365204.3-201ENST00000612448 685 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 AL390240.1-201ENST00000612950 384 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 AC025253.1-201ENST00000613623 543 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 AL136221.1-201ENST00000621449 509 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 AC005858.4-201ENST00000623191 700 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 AC118273.1-201ENST00000525324 3006 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS50Q96JG6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS50Q96JG6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 MIR7-3-201ENST00000384898 110 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS50Q96JG6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 AL513185.2-201ENST00000425543 193 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 TBCAP1-201ENST00000436520 327 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 SNRPFP3-201ENST00000457792 225 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 AP000852.1-201ENST00000472460 573 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 AC112206.3-201ENST00000514578 389 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 SNORA31.8-201ENST00000516327 108 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 RN7SKP209-201ENST00000516888 304 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 RNU6-352P-201ENST00000516908 107 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 RNU6-685P-201ENST00000517088 95 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 AC078814.3-201ENST00000553036 491 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 AL163153.1-201ENST00000554223 283 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 MIR4738-201ENST00000579134 87 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 MIR3944-201ENST00000581277 108 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 AC011712.1-201ENST00000588959 234 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 AC104763.2-201ENST00000604179 382 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 FP236240.3-201ENST00000623061 327 ntBASIC3.62□□□□□ -1.83
VPS50Q96JG6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VPS50Q96JG6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS50Q96JG6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS50Q96JG6 MAPK10-362ENST00000641864 4484 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 MFSD8-236ENST00000641509 4050 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS50Q96JG6 DEFB108F-201ENST00000344638 222 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 SNORA32.2-201ENST00000384049 122 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 MIR199A2-201ENST00000385289 110 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 CISD1P1-201ENST00000393907 327 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 OR6C66P-201ENST00000414917 930 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS50Q96JG6 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 ERLEC1P1-201ENST00000433806 578 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS50Q96JG6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS50Q96JG6 TTC39CP1-201ENST00000512513 755 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.61□□□□□ -1.83
VPS50Q96JG6 AC107953.1-201ENST00000522216 297 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 RAB11AP2-201ENST00000545905 639 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS50Q96JG6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS50Q96JG6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS50Q96JG6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS50Q96JG6 MIR5187-201ENST00000583479 76 ntBASIC3.61□□□□□ -1.83
VPS50Q96JG6 SNORA51-201ENST00000606420 132 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms