Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 NDUFB4P7-201ENST00000423198 363 ntBASIC5.67□□□□□ -1.5
LRCH3Q96II8 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 MTCO1P44-201ENST00000441935 243 ntBASIC5.67□□□□□ -1.5
LRCH3Q96II8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.67□□□□□ -1.5
LRCH3Q96II8 RNU2-56P-201ENST00000516826 190 ntBASIC5.67□□□□□ -1.5
LRCH3Q96II8 AP001328.1-201ENST00000528550 176 ntBASIC5.67□□□□□ -1.5
LRCH3Q96II8 LARP7P3-201ENST00000579888 337 ntBASIC5.67□□□□□ -1.5
LRCH3Q96II8 AL357075.2-201ENST00000614906 189 ntBASIC5.67□□□□□ -1.5
LRCH3Q96II8 AC034229.5-201ENST00000624258 185 ntBASIC5.67□□□□□ -1.5
LRCH3Q96II8 AP001340.1-201ENST00000624405 217 ntBASIC5.67□□□□□ -1.5
LRCH3Q96II8 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRCH3Q96II8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRCH3Q96II8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRCH3Q96II8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRCH3Q96II8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRCH3Q96II8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.67□□□□□ -1.5
LRCH3Q96II8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.66□□□□□ -1.5
LRCH3Q96II8 AC239868.2-201ENST00000564237 4527 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRCH3Q96II8 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
LRCH3Q96II8 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRCH3Q96II8 AC144833.1-201ENST00000567953 4089 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 RNA5SP453-201ENST00000362503 119 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 RNU6-103P-201ENST00000363686 107 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 OR1L6-202ENST00000373684 1044 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 RNU6-882P-201ENST00000391025 103 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 AL138785.1-201ENST00000425821 331 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.66□□□□□ -1.5
LRCH3Q96II8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.66□□□□□ -1.5
LRCH3Q96II8 RPL23AP24-201ENST00000458203 385 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.66□□□□□ -1.5
LRCH3Q96II8 RN7SKP260-201ENST00000516907 149 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.66□□□□□ -1.5
LRCH3Q96II8 DEFB117-201ENST00000602356 141 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 AL356218.2-201ENST00000605264 187 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 AL133481.2-203ENST00000607558 139 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 U7.2-201ENST00000607576 63 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.66□□□□□ -1.5
LRCH3Q96II8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRCH3Q96II8 AC011944.2-201ENST00000624440 683 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
LRCH3Q96II8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRCH3Q96II8 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRCH3Q96II8 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRCH3Q96II8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRCH3Q96II8 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.66□□□□□ -1.5
LRCH3Q96II8 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRCH3Q96II8 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.65□□□□□ -1.5
LRCH3Q96II8 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRCH3Q96II8 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRCH3Q96II8 AC083837.1-201ENST00000565297 2994 ntBASIC5.65□□□□□ -1.5
LRCH3Q96II8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.65□□□□□ -1.5
LRCH3Q96II8 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRCH3Q96II8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.65□□□□□ -1.5
LRCH3Q96II8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
LRCH3Q96II8 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.65□□□□□ -1.5
LRCH3Q96II8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRCH3Q96II8 RNU6-525P-201ENST00000363685 104 ntBASIC5.65□□□□□ -1.5
LRCH3Q96II8 SNORA72.2-201ENST00000365028 127 ntBASIC5.65□□□□□ -1.5
LRCH3Q96II8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LRCH3Q96II8 RNU6-159P-201ENST00000391080 106 ntBASIC5.65□□□□□ -1.5
LRCH3Q96II8 RNU6-712P-201ENST00000410558 100 ntBASIC5.65□□□□□ -1.5
LRCH3Q96II8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.65□□□□□ -1.5
LRCH3Q96II8 RPS27AP12-201ENST00000429552 465 ntBASIC5.65□□□□□ -1.5
LRCH3Q96II8 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.65□□□□□ -1.5
LRCH3Q96II8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.65□□□□□ -1.5
LRCH3Q96II8 IGHV5-78-201ENST00000450948 295 ntBASIC5.65□□□□□ -1.5
LRCH3Q96II8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRCH3Q96II8 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.65□□□□□ -1.5
LRCH3Q96II8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
LRCH3Q96II8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.65□□□□□ -1.5
LRCH3Q96II8 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LRCH3Q96II8 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.65□□□□□ -1.51
LRCH3Q96II8 AL353743.1-202ENST00000431724 1695 ntBASIC5.65□□□□□ -1.51
LRCH3Q96II8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRCH3Q96II8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRCH3Q96II8 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LRCH3Q96II8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRCH3Q96II8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRCH3Q96II8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRCH3Q96II8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.64□□□□□ -1.51
LRCH3Q96II8 AC007390.2-201ENST00000606229 3803 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRCH3Q96II8 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
LRCH3Q96II8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRCH3Q96II8 MIR208A-201ENST00000362287 71 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 RN7SKP145-201ENST00000363291 303 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 RNA5SP28-201ENST00000363841 119 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 MIR34A-201ENST00000385130 110 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 MIR298-201ENST00000401212 88 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 RN7SKP284-201ENST00000411002 343 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 AL158823.1-201ENST00000418441 478 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 CRIP1P1-201ENST00000427567 185 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 AC099670.2-201ENST00000435130 321 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 RPL7AP61-201ENST00000443410 636 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms