Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.6□□□□□ -1.83
NMD3Q96D46 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NMD3Q96D46 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NMD3Q96D46 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NMD3Q96D46 FTLP6-201ENST00000355274 422 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 Y_RNA.70-201ENST00000362886 110 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 SNORD35B-201ENST00000363660 87 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 RNU6-522P-201ENST00000364497 107 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 Y_RNA.530-201ENST00000384587 101 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NMD3Q96D46 MIR1251-201ENST00000408552 70 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.6□□□□□ -1.83
NMD3Q96D46 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.6□□□□□ -1.83
NMD3Q96D46 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.6□□□□□ -1.83
NMD3Q96D46 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.6□□□□□ -1.83
NMD3Q96D46 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.6□□□□□ -1.83
NMD3Q96D46 RPL12P25-201ENST00000455592 494 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.6□□□□□ -1.83
NMD3Q96D46 AC008716.1-201ENST00000511084 513 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 AC112206.3-201ENST00000514578 389 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 RNU6-507P-201ENST00000516045 100 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.6□□□□□ -1.83
NMD3Q96D46 RAB9BP1-201ENST00000519581 626 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.6□□□□□ -1.83
NMD3Q96D46 MIR3941-201ENST00000582572 103 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.6□□□□□ -1.83
NMD3Q96D46 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NMD3Q96D46 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.6□□□□□ -1.83
NMD3Q96D46 Y_RNA.804-201ENST00000615262 101 ntBASIC3.6□□□□□ -1.83
NMD3Q96D46 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.6□□□□□ -1.83
NMD3Q96D46 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NMD3Q96D46 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NMD3Q96D46 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NMD3Q96D46 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
NMD3Q96D46 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.59□□□□□ -1.83
NMD3Q96D46 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NMD3Q96D46 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 SNORA60-201ENST00000362396 134 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 RNU6-217P-201ENST00000384164 104 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NMD3Q96D46 RNU6-1009P-201ENST00000390996 107 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AL078595.1-201ENST00000404458 226 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.59□□□□□ -1.83
NMD3Q96D46 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.59□□□□□ -1.83
NMD3Q96D46 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.59□□□□□ -1.83
NMD3Q96D46 AL360271.2-201ENST00000447710 161 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AL590664.1-201ENST00000448065 339 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.59□□□□□ -1.83
NMD3Q96D46 HMGB1P30-201ENST00000492455 606 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AC139453.3-201ENST00000493276 369 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 RPL29P14-201ENST00000495837 428 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AC079140.5-201ENST00000507882 310 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 MTND3P25-201ENST00000509243 135 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AC025755.1-201ENST00000521306 278 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AC107953.1-201ENST00000522216 297 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.59□□□□□ -1.83
NMD3Q96D46 AC087241.2-201ENST00000535801 324 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AC011602.1-201ENST00000546484 331 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.59□□□□□ -1.83
NMD3Q96D46 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.59□□□□□ -1.83
NMD3Q96D46 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.59□□□□□ -1.83
NMD3Q96D46 IPO5P1-202ENST00000600039 287 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NMD3Q96D46 AL357078.3-201ENST00000607528 618 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 FTX_3.1-201ENST00000610451 147 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AC022306.2-201ENST00000617563 647 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NMD3Q96D46 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.59□□□□□ -1.83
NMD3Q96D46 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.59□□□□□ -1.84
NMD3Q96D46 AC118273.1-201ENST00000525324 3006 ntBASIC3.59□□□□□ -1.84
NMD3Q96D46 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.59□□□□□ -1.84
NMD3Q96D46 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.58□□□□□ -1.84
NMD3Q96D46 AC121333.1-201ENST00000567488 2709 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.58□□□□□ -1.84
NMD3Q96D46 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NMD3Q96D46 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NMD3Q96D46 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NMD3Q96D46 RNU6-845P-201ENST00000362578 103 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 RNU6-283P-201ENST00000364788 107 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
NMD3Q96D46 PTMAP5-201ENST00000393073 333 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 EIF4E2P1-201ENST00000393781 255 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.58□□□□□ -1.84
NMD3Q96D46 AL645937.1-202ENST00000421799 937 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 AC007560.1-201ENST00000426912 237 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 AC073063.1-201ENST00000434352 607 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 IFNA20P-201ENST00000436840 528 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.58□□□□□ -1.84
NMD3Q96D46 RANP8-201ENST00000444720 713 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 SSXP4-201ENST00000451349 245 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 AC006463.2-201ENST00000473326 348 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 RPS4XP22-201ENST00000480755 780 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 AC022493.1-201ENST00000492984 337 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 AC091951.2-201ENST00000500762 203 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 AC110768.1-201ENST00000509222 400 ntBASIC3.58□□□□□ -1.84
NMD3Q96D46 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms