Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAB40AQ8WXH6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 Y_RNA.38-201ENST00000362617 102 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 RNU6-270P-201ENST00000364131 105 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 Y_RNA.248-201ENST00000364501 109 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 RNU6-534P-201ENST00000364877 106 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 Y_RNA.295-201ENST00000364918 102 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 RN7SKP156-201ENST00000410308 342 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 EEF1A1P40-201ENST00000412883 573 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 FGF7P6-202ENST00000451282 293 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 SNORA84-201ENST00000459229 133 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 RN7SL542P-201ENST00000467147 294 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AL117351.2-201ENST00000513571 157 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 RNU4-29P-201ENST00000515943 174 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 SNORA31.1-201ENST00000515993 133 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 SNORA31.5-201ENST00000516190 133 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AC092325.1-201ENST00000566449 554 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 MIR1273C-201ENST00000578669 77 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 MIR548AC-201ENST00000585049 88 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AC104458.1-201ENST00000608243 463 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 DISC2.1-201ENST00000612827 205 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 DUSP12P1-201ENST00000612874 516 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AC005344.1-201ENST00000613391 459 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 SNORD39.4-201ENST00000620099 78 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 FP236240.3-201ENST00000623061 327 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 HSPA8P4-201ENST00000511877 1920 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 MTND4P35-201ENST00000604257 1375 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 AP004289.2-201ENST00000444413 1457 ntBASIC3.22□□□□□ -1.89
RAB40AQ8WXH6 ASNSP3-201ENST00000451989 1306 ntBASIC3.21□□□□□ -1.89
RAB40AQ8WXH6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 Y_RNA.33-201ENST00000362591 102 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 RNY3P3-201ENST00000363816 102 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 RNU6-395P-201ENST00000365662 106 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 RNU6-1025P-201ENST00000410629 104 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 RNU6-1068P-201ENST00000410958 103 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AC099548.1-201ENST00000421443 426 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 HMGN2P30-201ENST00000423237 256 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AC008264.1-201ENST00000447612 367 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 MRPS31P2-201ENST00000451581 518 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AC010099.1-201ENST00000455434 375 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 RPL21P41-201ENST00000459863 264 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AC010401.1-201ENST00000463867 348 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 RPL21P129-201ENST00000491732 478 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 SNORD60.2-201ENST00000516883 86 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 PSMA2P1-201ENST00000526365 646 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AL137161.1-201ENST00000532231 390 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AC106782.4-201ENST00000568264 210 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AC245389.1-201ENST00000605141 529 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 uc_338.34-201ENST00000617467 174 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 AC079684.1-201ENST00000621405 437 ntBASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RAB40AQ8WXH6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 RNU1-75P-201ENST00000347264 129 ntBASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
RAB40AQ8WXH6 PTMAP2-201ENST00000397627 327 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms