Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC244505.4-201ENST00000434905 287 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 SSXP5-201ENST00000443473 287 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 MTND2P24-201ENST00000453434 806 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC008155.2-201ENST00000464337 397 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 RPS20P22-201ENST00000473700 357 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AL049874.1-201ENST00000489560 388 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC117522.1-201ENST00000509821 380 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-927P-201ENST00000516199 100 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-314P-201ENST00000516574 104 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AP006587.4-201ENST00000526053 529 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AL512310.1-201ENST00000548639 172 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 HMGB1P6-201ENST00000569046 646 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC078899.3-201ENST00000599065 212 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC025165.5-201ENST00000602802 578 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC012507.3-201ENST00000603556 477 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC025449.1-201ENST00000603896 529 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AL121992.2-201ENST00000606262 256 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC090517.2-201ENST00000614966 680 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AP001486.3-201ENST00000615334 372 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 U6atac.1-201ENST00000616025 117 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AL355365.1-201ENST00000616480 294 ntBASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SLC44A1Q8WWI5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 Y_RNA.481-201ENST00000384373 102 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 MIR1-2-201ENST00000384961 85 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 MIR454-201ENST00000390180 115 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-817P-201ENST00000391083 104 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 RN7SKP123-201ENST00000410732 291 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC063979.1-201ENST00000415539 377 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 USP9YP18-201ENST00000425912 695 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 UBE2V1P8-201ENST00000437166 265 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 RPS15AP9-201ENST00000439856 381 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 DDX3P2-201ENST00000446138 111 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC003071.1-201ENST00000451219 789 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC013267.1-201ENST00000458227 267 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC116562.3-201ENST00000506136 177 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC009646.1-201ENST00000510455 318 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC011352.1-201ENST00000512300 793 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AP001804.3-201ENST00000525146 880 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AP001646.1-201ENST00000527936 915 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC068587.5-201ENST00000528506 175 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 OR4R1P-201ENST00000529879 463 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 HMGB1P33-201ENST00000563485 527 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AL133393.1-201ENST00000603277 287 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC174048.1-201ENST00000603389 144 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC007363.1-201ENST00000604736 620 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AC007998.5-201ENST00000622938 237 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AL353743.1-202ENST00000431724 1695 ntBASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC44A1Q8WWI5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 API5P2-201ENST00000397055 1498 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-1085P-201ENST00000363576 107 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-188P-201ENST00000364207 107 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 RNA5SP267-201ENST00000364893 126 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 SNORA51.4-201ENST00000364993 124 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-641P-201ENST00000384006 107 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 RNU6-701P-201ENST00000384059 107 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AL031121.1-201ENST00000406553 254 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 U3.42-201ENST00000408746 214 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AL353193.1-201ENST00000421444 268 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AL590383.1-201ENST00000428602 75 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 MTATP6P16-201ENST00000434543 526 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 HIGD1AP11-201ENST00000438361 280 ntBASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC44A1Q8WWI5 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms