Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS8Q8N3P4 KATNBL1P3-201ENST00000443475 909 ntBASIC1.35□□□□□ -2.19
VPS8Q8N3P4 DYNLL1P5-201ENST00000467158 270 ntBASIC1.35□□□□□ -2.19
VPS8Q8N3P4 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VPS8Q8N3P4 RNA5SP384-201ENST00000516615 116 ntBASIC1.35□□□□□ -2.19
VPS8Q8N3P4 AC008562.1-201ENST00000521763 330 ntBASIC1.35□□□□□ -2.19
VPS8Q8N3P4 PSMA3P-201ENST00000555485 635 ntBASIC1.35□□□□□ -2.19
VPS8Q8N3P4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
VPS8Q8N3P4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
VPS8Q8N3P4 AC010329.5-201ENST00000623497 2174 ntBASIC1.34□□□□□ -2.19
VPS8Q8N3P4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.34□□□□□ -2.19
VPS8Q8N3P4 MTATP6P31-201ENST00000406985 692 ntBASIC1.34□□□□□ -2.19
VPS8Q8N3P4 RPL27AP8-201ENST00000424277 446 ntBASIC1.34□□□□□ -2.19
VPS8Q8N3P4 SDAD1P3-201ENST00000427380 333 ntBASIC1.34□□□□□ -2.19
VPS8Q8N3P4 AC005410.1-202ENST00000460347 485 ntBASIC1.34□□□□□ -2.19
VPS8Q8N3P4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS8Q8N3P4 AC111193.1-201ENST00000504097 155 ntBASIC1.34□□□□□ -2.19
VPS8Q8N3P4 SNORA70.16-201ENST00000516390 95 ntBASIC1.34□□□□□ -2.19
VPS8Q8N3P4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.19
VPS8Q8N3P4 MIR934-201ENST00000401241 83 ntBASIC1.33□□□□□ -2.2
VPS8Q8N3P4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS8Q8N3P4 AC093106.2-201ENST00000428212 385 ntBASIC1.33□□□□□ -2.2
VPS8Q8N3P4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS8Q8N3P4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS8Q8N3P4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS8Q8N3P4 AC092991.1-201ENST00000477176 376 ntBASIC1.33□□□□□ -2.2
VPS8Q8N3P4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VPS8Q8N3P4 TPT1P8-201ENST00000510120 555 ntBASIC1.33□□□□□ -2.2
VPS8Q8N3P4 SCARNA11.3-201ENST00000517276 130 ntBASIC1.33□□□□□ -2.2
VPS8Q8N3P4 AC008676.3-201ENST00000521237 435 ntBASIC1.33□□□□□ -2.2
VPS8Q8N3P4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS8Q8N3P4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS8Q8N3P4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS8Q8N3P4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VPS8Q8N3P4 RNU4-23P-201ENST00000362839 140 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 RNU6-452P-201ENST00000384406 107 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AL158823.1-201ENST00000418441 478 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC104629.2-201ENST00000468627 598 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC107626.1-201ENST00000471084 183 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC117503.1-201ENST00000472241 394 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC010186.2-204ENST00000537668 439 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC073308.1-201ENST00000623696 305 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 SNORD114-26-201ENST00000363543 72 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 RNU6-712P-201ENST00000410558 100 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC099677.1-201ENST00000420575 175 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC098862.1-201ENST00000504991 413 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 CYP3A137P-201ENST00000562436 69 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 MIR3126-201ENST00000577443 74 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 PRR13P7-201ENST00000605538 430 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 MIR6515-201ENST00000619843 57 ntBASIC1.32□□□□□ -2.2
VPS8Q8N3P4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS8Q8N3P4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VPS8Q8N3P4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.31□□□□□ -2.2
VPS8Q8N3P4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
VPS8Q8N3P4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
VPS8Q8N3P4 AL356131.1-201ENST00000405826 414 ntBASIC1.31□□□□□ -2.2
VPS8Q8N3P4 AC244636.1-201ENST00000421152 228 ntBASIC1.31□□□□□ -2.2
VPS8Q8N3P4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.31□□□□□ -2.2
VPS8Q8N3P4 AC023512.1-201ENST00000444513 499 ntBASIC1.31□□□□□ -2.2
VPS8Q8N3P4 OR6C72P-201ENST00000451403 892 ntBASIC1.31□□□□□ -2.2
VPS8Q8N3P4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.31□□□□□ -2.2
VPS8Q8N3P4 RPL12P25-201ENST00000455592 494 ntBASIC1.31□□□□□ -2.2
VPS8Q8N3P4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.31□□□□□ -2.2
VPS8Q8N3P4 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.31□□□□□ -2.2
VPS8Q8N3P4 AC008834.1-201ENST00000511612 175 ntBASIC1.31□□□□□ -2.2
VPS8Q8N3P4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.31□□□□□ -2.2
VPS8Q8N3P4 SNORA48.10-201ENST00000516965 160 ntBASIC1.31□□□□□ -2.2
VPS8Q8N3P4 AC092470.1-201ENST00000546187 132 ntBASIC1.31□□□□□ -2.2
VPS8Q8N3P4 AC079791.1-201ENST00000605356 973 ntBASIC1.31□□□□□ -2.2
VPS8Q8N3P4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS8Q8N3P4 AL356473.1-201ENST00000406203 1408 ntBASIC1.3□□□□□ -2.2
VPS8Q8N3P4 SNORD114-2-201ENST00000363953 78 ntBASIC1.3□□□□□ -2.2
VPS8Q8N3P4 RNU1-133P-201ENST00000364867 167 ntBASIC1.3□□□□□ -2.2
VPS8Q8N3P4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
VPS8Q8N3P4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.3□□□□□ -2.2
VPS8Q8N3P4 RNU6-420P-201ENST00000458780 107 ntBASIC1.3□□□□□ -2.2
VPS8Q8N3P4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VPS8Q8N3P4 AC008494.2-201ENST00000514544 370 ntBASIC1.3□□□□□ -2.2
VPS8Q8N3P4 RNA5SP436-201ENST00000516020 115 ntBASIC1.3□□□□□ -2.2
VPS8Q8N3P4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.3□□□□□ -2.2
VPS8Q8N3P4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.3□□□□□ -2.2
VPS8Q8N3P4 AC013468.1-201ENST00000608680 598 ntBASIC1.3□□□□□ -2.2
VPS8Q8N3P4 AC005021.1-201ENST00000608730 355 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms