Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 uc_338.34-201ENST00000617467 174 ntBASIC3.72□□□□□ -1.81
KRT78Q8N1N4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRT78Q8N1N4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
KRT78Q8N1N4 SNORD39.4-201ENST00000620099 78 ntBASIC3.72□□□□□ -1.81
KRT78Q8N1N4 AL357559.1-201ENST00000622228 274 ntBASIC3.72□□□□□ -1.81
KRT78Q8N1N4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.72□□□□□ -1.81
KRT78Q8N1N4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.72□□□□□ -1.81
KRT78Q8N1N4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRT78Q8N1N4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.72□□□□□ -1.81
KRT78Q8N1N4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRT78Q8N1N4 ASNSP3-201ENST00000451989 1306 ntBASIC3.71□□□□□ -1.81
KRT78Q8N1N4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 MIR372-201ENST00000362225 67 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 RNY3P3-201ENST00000363816 102 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 SNORA4.3-201ENST00000365564 137 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 RNU6-395P-201ENST00000365662 106 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AL354719.1-201ENST00000406535 843 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AL356776.1-201ENST00000406574 447 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 RNU6-908P-201ENST00000410160 94 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 RNU6-1025P-201ENST00000410629 104 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 RNA5SP38-201ENST00000410750 119 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 SNRPEP10-201ENST00000420249 274 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 HMGN2P30-201ENST00000423237 256 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AC007389.2-201ENST00000434630 306 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 OR4C10P-201ENST00000434991 931 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 CALM1P1-201ENST00000442082 433 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 RPS24P13-201ENST00000442520 397 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 PMCHL2-203ENST00000457791 237 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 RNU7-170P-201ENST00000459303 61 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AC012181.1-201ENST00000479895 423 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AL137161.1-201ENST00000532231 390 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AL442663.2-201ENST00000554385 511 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 MIR1273C-201ENST00000578669 77 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 MIR4286-201ENST00000580651 93 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 MIR4795-201ENST00000584182 89 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 HSPE1P7-201ENST00000604681 321 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 FTX_3.1-201ENST00000610451 147 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 AL442067.2-201ENST00000614033 363 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 MIR3662-201ENST00000637030 95 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 MTND4P35-201ENST00000604257 1375 ntBASIC3.71□□□□□ -1.82
KRT78Q8N1N4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
KRT78Q8N1N4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AL139276.1-201ENST00000311910 1001 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 RNU4-66P-201ENST00000365199 138 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 PTMAP5-201ENST00000393073 333 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AL136116.1-201ENST00000403591 381 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 Z98941.1-201ENST00000407764 100 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 SUMO2P6-201ENST00000505273 288 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 SUMO2P20-201ENST00000520803 283 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 OR8R1P-201ENST00000543943 764 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 BNIP3P6-201ENST00000549284 499 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AC090877.1-201ENST00000561418 344 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 MIR4474-201ENST00000579189 78 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AC015917.1-201ENST00000579654 510 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 AL162730.1-201ENST00000605734 292 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 DUSP12P1-201ENST00000612874 516 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 PLCE1P1-201ENST00000622094 305 ntBASIC3.7□□□□□ -1.82
KRT78Q8N1N4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.7□□□□□ -1.82
KRT78Q8N1N4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms