Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 RNA5SP341-201ENST00000516261 117 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 AP001646.1-201ENST00000527936 915 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 AC104383.1-201ENST00000530297 370 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 AC004024.1-201ENST00000549244 247 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 MIR3688-2-201ENST00000636963 87 ntBASIC3.57□□□□□ -1.84
VPS52Q8N1B4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
VPS52Q8N1B4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS52Q8N1B4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AL365361.1-201ENST00000566942 3481 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS52Q8N1B4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS52Q8N1B4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
VPS52Q8N1B4 ZNF680P1-201ENST00000436625 1469 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 RNU6-1322P-201ENST00000364309 107 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 SAR1AP2-201ENST00000392696 594 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AC018630.2-202ENST00000422992 927 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AC008850.1-201ENST00000427546 362 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 MTATP6P16-201ENST00000434543 526 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 MTATP6P30-201ENST00000443540 664 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AL356010.1-201ENST00000456364 102 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 RPL27AP5-201ENST00000469428 449 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 RPL7P5-201ENST00000471472 736 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AC105914.1-201ENST00000511798 226 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 SNORD59.2-201ENST00000516873 68 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 RN7SKP258-201ENST00000517151 304 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 NRON-201ENST00000517270 370 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 RNU6-840P-201ENST00000517275 65 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AC090136.1-201ENST00000520009 240 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS52Q8N1B4 MIR4801-201ENST00000582704 82 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AP001029.3-201ENST00000588063 596 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AL451007.1-201ENST00000595491 289 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS52Q8N1B4 RBM11P1-201ENST00000604951 799 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 Z84480.1-201ENST00000605131 311 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AP001486.3-201ENST00000615334 372 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AL356321.1-201ENST00000621360 228 ntBASIC3.56□□□□□ -1.84
VPS52Q8N1B4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
VPS52Q8N1B4 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC093010.3-201ENST00000570269 15214 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 RNU5A-1-201ENST00000362698 116 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 RNU4-12P-201ENST00000365233 139 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 SMIM11P1-201ENST00000369586 178 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 DEFB109C-201ENST00000382575 264 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 DEFB109B-201ENST00000382656 264 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 Y_RNA.402-201ENST00000383972 102 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 MIR514A1-201ENST00000385133 98 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 MIR454-201ENST00000390180 115 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 BTF3P7-201ENST00000407097 488 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 Z99755.1-201ENST00000414048 380 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 DDX3P2-201ENST00000446138 111 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 FDX1P2-201ENST00000450769 375 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC027673.1-201ENST00000456245 405 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 RPS4XP2-201ENST00000458402 793 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC083798.1-201ENST00000472671 131 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC109927.2-201ENST00000506416 303 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 SNORA31.3-201ENST00000516029 96 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 RNU6-718P-201ENST00000516166 105 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 RNU6-1178P-201ENST00000516674 107 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC107934.2-201ENST00000518653 310 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AP006587.4-201ENST00000526053 529 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 OR4R1P-201ENST00000529879 463 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC005476.1-201ENST00000554427 397 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 EIF4BP1-201ENST00000554881 351 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AL512360.1-201ENST00000555346 234 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC025678.1-201ENST00000567861 338 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 SNORA59B-202ENST00000578183 701 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC024619.4-201ENST00000580924 316 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC073657.2-201ENST00000605661 303 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC007014.2-201ENST00000615581 479 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AC093648.1-201ENST00000623546 606 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms