Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.1□□□□□ -2.23
XRN1Q8IZH2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.1□□□□□ -2.23
XRN1Q8IZH2 AL589743.1-201ENST00000551932 2712 ntBASIC1.1□□□□□ -2.23
XRN1Q8IZH2 AC008555.8-201ENST00000623602 2168 ntBASIC1.1□□□□□ -2.23
XRN1Q8IZH2 MIR126-201ENST00000362291 85 ntBASIC1.09□□□□□ -2.23
XRN1Q8IZH2 AL356131.1-201ENST00000405826 414 ntBASIC1.09□□□□□ -2.23
XRN1Q8IZH2 MTCO3P4-201ENST00000419236 787 ntBASIC1.09□□□□□ -2.23
XRN1Q8IZH2 AC004383.1-201ENST00000438135 289 ntBASIC1.09□□□□□ -2.23
XRN1Q8IZH2 AL353689.1-201ENST00000438895 199 ntBASIC1.09□□□□□ -2.23
XRN1Q8IZH2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.09□□□□□ -2.23
XRN1Q8IZH2 AC027575.1-201ENST00000481064 460 ntBASIC1.09□□□□□ -2.23
XRN1Q8IZH2 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.09□□□□□ -2.23
XRN1Q8IZH2 RNU7-193P-201ENST00000516723 65 ntBASIC1.09□□□□□ -2.23
XRN1Q8IZH2 SNORA31.25-201ENST00000517242 134 ntBASIC1.09□□□□□ -2.23
XRN1Q8IZH2 OR1M4P-201ENST00000589199 287 ntBASIC1.09□□□□□ -2.23
XRN1Q8IZH2 SNORD14A-201ENST00000606526 91 ntBASIC1.09□□□□□ -2.23
XRN1Q8IZH2 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
XRN1Q8IZH2 CR848007.1-201ENST00000442354 1699 ntBASIC1.09□□□□□ -2.23
XRN1Q8IZH2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
XRN1Q8IZH2 Y_RNA.258-201ENST00000364613 105 ntBASIC1.09□□□□□ -2.24
XRN1Q8IZH2 U3.20-201ENST00000390909 217 ntBASIC1.09□□□□□ -2.24
XRN1Q8IZH2 RNA5SP193-201ENST00000410353 107 ntBASIC1.09□□□□□ -2.24
XRN1Q8IZH2 RNU4-78P-201ENST00000410940 126 ntBASIC1.09□□□□□ -2.24
XRN1Q8IZH2 HMGB3P31-201ENST00000413333 595 ntBASIC1.09□□□□□ -2.24
XRN1Q8IZH2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.09□□□□□ -2.24
XRN1Q8IZH2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.09□□□□□ -2.24
XRN1Q8IZH2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.09□□□□□ -2.24
XRN1Q8IZH2 AL353718.1-201ENST00000451028 517 ntBASIC1.09□□□□□ -2.24
XRN1Q8IZH2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.09□□□□□ -2.24
XRN1Q8IZH2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.09□□□□□ -2.24
XRN1Q8IZH2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.09□□□□□ -2.24
XRN1Q8IZH2 MIR4711-201ENST00000578274 70 ntBASIC1.09□□□□□ -2.24
XRN1Q8IZH2 AP001330.4-201ENST00000604350 154 ntBASIC1.09□□□□□ -2.24
XRN1Q8IZH2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.09□□□□□ -2.24
XRN1Q8IZH2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.09□□□□□ -2.24
XRN1Q8IZH2 AC007785.2-201ENST00000598627 1916 ntBASIC1.08□□□□□ -2.24
XRN1Q8IZH2 RNU1-105P-201ENST00000363470 161 ntBASIC1.08□□□□□ -2.24
XRN1Q8IZH2 RNU6-1251P-201ENST00000364502 107 ntBASIC1.08□□□□□ -2.24
XRN1Q8IZH2 MIR934-201ENST00000401241 83 ntBASIC1.08□□□□□ -2.24
XRN1Q8IZH2 SFR1P2-201ENST00000421841 730 ntBASIC1.08□□□□□ -2.24
XRN1Q8IZH2 RNU6-319P-201ENST00000516025 108 ntBASIC1.08□□□□□ -2.24
XRN1Q8IZH2 RNA5SP330-201ENST00000517096 96 ntBASIC1.08□□□□□ -2.24
XRN1Q8IZH2 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.08□□□□□ -2.24
XRN1Q8IZH2 AC090666.1-201ENST00000578241 445 ntBASIC1.08□□□□□ -2.24
XRN1Q8IZH2 FAM60BP-201ENST00000578364 658 ntBASIC1.08□□□□□ -2.24
XRN1Q8IZH2 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.08□□□□□ -2.24
XRN1Q8IZH2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.08□□□□□ -2.24
XRN1Q8IZH2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.08□□□□□ -2.24
XRN1Q8IZH2 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.07□□□□□ -2.24
XRN1Q8IZH2 RNU6-1249P-201ENST00000363237 111 ntBASIC1.07□□□□□ -2.24
XRN1Q8IZH2 Y_RNA.115-201ENST00000363272 98 ntBASIC1.07□□□□□ -2.24
XRN1Q8IZH2 RNU6-263P-201ENST00000363811 107 ntBASIC1.07□□□□□ -2.24
XRN1Q8IZH2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
XRN1Q8IZH2 RNU6-244P-201ENST00000391028 104 ntBASIC1.07□□□□□ -2.24
XRN1Q8IZH2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.07□□□□□ -2.24
XRN1Q8IZH2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.07□□□□□ -2.24
XRN1Q8IZH2 MIR5571-201ENST00000577998 113 ntBASIC1.07□□□□□ -2.24
XRN1Q8IZH2 MIR4529-201ENST00000578110 78 ntBASIC1.07□□□□□ -2.24
XRN1Q8IZH2 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.07□□□□□ -2.24
XRN1Q8IZH2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
XRN1Q8IZH2 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.06□□□□□ -2.24
XRN1Q8IZH2 RPS15AP27-201ENST00000449183 343 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.06□□□□□ -2.24
XRN1Q8IZH2 snoU13.28-201ENST00000459235 104 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.06□□□□□ -2.24
XRN1Q8IZH2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC040174.2-201ENST00000602701 465 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC079395.3-201ENST00000615161 484 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.06□□□□□ -2.24
XRN1Q8IZH2 SNORA23-201ENST00000365128 182 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 RNU6-1293P-201ENST00000384077 107 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 SNORD65-201ENST00000391079 73 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AL513475.1-201ENST00000406602 315 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.06□□□□□ -2.24
XRN1Q8IZH2 RPL23AP6-201ENST00000446637 472 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.06□□□□□ -2.24
XRN1Q8IZH2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AP001960.1-201ENST00000506494 658 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC108078.1-201ENST00000508073 725 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC093770.1-201ENST00000511559 571 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AP005639.2-201ENST00000527592 928 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC133485.1-201ENST00000567176 124 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC138907.6-201ENST00000568401 126 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 AC007038.2-201ENST00000608095 740 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 RNU6-156P-201ENST00000621869 107 ntBASIC1.06□□□□□ -2.24
XRN1Q8IZH2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
XRN1Q8IZH2 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
XRN1Q8IZH2 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.05□□□□□ -2.24
XRN1Q8IZH2 USP12PX-201ENST00000432383 1057 ntBASIC1.05□□□□□ -2.24
XRN1Q8IZH2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.05□□□□□ -2.24
XRN1Q8IZH2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.05□□□□□ -2.24
XRN1Q8IZH2 TPT1P8-201ENST00000510120 555 ntBASIC1.05□□□□□ -2.24
XRN1Q8IZH2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.05□□□□□ -2.24
XRN1Q8IZH2 AC084033.1-201ENST00000550830 633 ntBASIC1.05□□□□□ -2.24
XRN1Q8IZH2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.05□□□□□ -2.24
XRN1Q8IZH2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.05□□□□□ -2.24
XRN1Q8IZH2 AC073111.2-201ENST00000605657 1075 ntBASIC1.05□□□□□ -2.24
XRN1Q8IZH2 AC135507.1-201ENST00000607214 561 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms