Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 RPS20P10-201ENST00000451209 253 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 AC107027.2-201ENST00000512197 115 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 AC103996.1-201ENST00000555468 102 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 MIR4431-201ENST00000579990 94 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 RN7SL690P-201ENST00000582087 240 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 MIR548AC-201ENST00000585049 88 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 AC068831.7-201ENST00000616954 363 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NPAS3Q8IXF0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NPAS3Q8IXF0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
NPAS3Q8IXF0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.15□□□□□ -1.58
NPAS3Q8IXF0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.15□□□□□ -1.58
NPAS3Q8IXF0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPAS3Q8IXF0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPAS3Q8IXF0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
NPAS3Q8IXF0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPAS3Q8IXF0 RNU6-294P-201ENST00000364999 102 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 Y_RNA.570-201ENST00000384750 101 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 RPS15AP5-201ENST00000436276 388 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 AC005154.2-201ENST00000438110 379 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 RPS15AP7-201ENST00000439294 405 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 AC022431.1-201ENST00000450941 438 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 snoU13.1-201ENST00000459157 104 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 RPL23AP56-201ENST00000460778 453 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 RPS29P24-201ENST00000486345 171 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 NDUFA5P6-201ENST00000542110 379 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 MIR4284-201ENST00000578924 81 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 AC107294.1-201ENST00000609524 467 ntBASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NPAS3Q8IXF0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 AC092593.1-201ENST00000515413 1815 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 RNU6-235P-201ENST00000362644 107 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 RNA5SP361-201ENST00000362686 118 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 RNU6-1293P-201ENST00000384077 107 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 SNORA48.4-201ENST00000391089 134 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 AC063979.1-201ENST00000415539 377 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 RNU7-197P-201ENST00000458836 62 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 RNU6-953P-201ENST00000459154 107 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 HMGN1P11-201ENST00000508668 303 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 RNU1-86P-201ENST00000516108 154 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 RNU1-107P-201ENST00000516617 154 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 RNA5SP392-201ENST00000516905 112 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 RNU6-156P-201ENST00000621869 107 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 MIR1245B-201ENST00000636115 69 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 AC068647.1-201ENST00000489539 2265 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 ZNF204P-201ENST00000416749 2397 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 AC116667.1-201ENST00000604855 2072 ntBASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
NPAS3Q8IXF0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 DDX10P1-201ENST00000448545 1933 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 PROS2P-201ENST00000474651 1951 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 AL731532.2-201ENST00000623542 1953 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 RNU6-225P-201ENST00000384613 103 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 AL353621.1-201ENST00000418219 243 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms