Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 GTF2IP9-201ENST00000502460 301 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AP005902.1-201ENST00000521358 186 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 HMGN2P15-201ENST00000585707 270 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 BNIP3P39-201ENST00000601077 554 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AL596327.1-201ENST00000603629 213 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AC097478.2-201ENST00000610572 514 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 AL133445.2-201ENST00000611191 527 ntBASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CDKL3Q8IVW4 SNORA23-201ENST00000365128 182 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 RNU6-516P-201ENST00000411381 104 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC084290.1-201ENST00000434995 374 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 RPL23AP7-203ENST00000449021 469 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 PSPHP1-201ENST00000450062 261 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 MTND1P9-201ENST00000453775 944 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC104090.1-201ENST00000506341 1171 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC023141.11-201ENST00000508864 202 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 MTND1P8-201ENST00000571424 950 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC005951.2-201ENST00000576282 495 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC009314.1-201ENST00000603871 304 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AL450336.1-201ENST00000605180 586 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AL158042.1-201ENST00000605338 460 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AP000484.1-201ENST00000620067 1252 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC009268.2-201ENST00000621925 457 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AC080128.1-201ENST00000474389 1917 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 AL359851.1-201ENST00000569460 4997 ntBASIC2.15□□□□□ -2.07
CDKL3Q8IVW4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC131280.1-202ENST00000624067 4211 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 RNU6-853P-201ENST00000364306 107 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 RNU1-39P-201ENST00000383897 165 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 RNU6-220P-201ENST00000390919 107 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AL109755.1-201ENST00000401791 649 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 MIR320C1-201ENST00000408566 88 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC083875.1-201ENST00000419509 405 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AL356320.1-201ENST00000429616 163 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 OSTCP8-201ENST00000445117 448 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 MTCO1P27-201ENST00000448269 226 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 ATG12P2-201ENST00000456830 416 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC022447.3-201ENST00000506865 495 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC008413.1-201ENST00000511864 177 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AL138976.2-201ENST00000563989 694 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC104984.5-201ENST00000586878 94 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC136601.2-201ENST00000604356 474 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AL592221.1-201ENST00000605266 382 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC112220.3-201ENST00000605502 502 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AL161423.1-201ENST00000613700 262 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC010378.1-201ENST00000619270 362 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC013470.4-201ENST00000619978 986 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC064859.1-201ENST00000624741 174 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC019226.1-201ENST00000625666 515 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 AC010329.5-201ENST00000623497 2174 ntBASIC2.14□□□□□ -2.07
CDKL3Q8IVW4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CDKL3Q8IVW4 SNORA4.1-201ENST00000364263 144 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms