Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF135Q8IUD6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF135Q8IUD6 LINC02555-201ENST00000563933 1951 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 RNU6-227P-201ENST00000362865 103 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 RNA5SP515-201ENST00000364570 118 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 Y_RNA.405-201ENST00000383979 100 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 Y_RNA.451-201ENST00000384200 100 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 Y_RNA.524-201ENST00000384564 100 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 Y_RNA.561-201ENST00000384694 100 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 MIR34A-201ENST00000385130 110 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 MIR589-201ENST00000385238 99 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 SNORA57.1-201ENST00000391227 145 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 OR4C10P-201ENST00000434991 931 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 RPL23AP22-201ENST00000437556 453 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.3□□□□□ -1.56
RNF135Q8IUD6 RPL21P129-201ENST00000491732 478 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 AC023424.1-201ENST00000496058 459 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 SERF1AP1-201ENST00000514575 187 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 RNA5SP290-201ENST00000517133 127 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 AC005476.1-201ENST00000554427 397 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 AC136932.1-201ENST00000574771 208 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 MIR3921-201ENST00000577308 85 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 AC005046.1-201ENST00000608515 625 ntBASIC5.3□□□□□ -1.56
RNF135Q8IUD6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF135Q8IUD6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF135Q8IUD6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNF135Q8IUD6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
RNF135Q8IUD6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNF135Q8IUD6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
RNF135Q8IUD6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 RNU6-428P-201ENST00000362942 107 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 RNU6-1290P-201ENST00000362957 109 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 RNY3P4-201ENST00000384428 101 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 RNU2-51P-201ENST00000410708 197 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 AC244098.2-201ENST00000422068 99 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 AL445305.1-201ENST00000432577 575 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 BX679664.1-201ENST00000434429 253 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 RNU7-87P-201ENST00000459343 62 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 MIR4643-201ENST00000577473 78 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 AC023575.1-201ENST00000580510 358 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 MIR92B-201ENST00000607575 96 ntBASIC5.29□□□□□ -1.56
RNF135Q8IUD6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF135Q8IUD6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 SCARNA15-201ENST00000607520 4325 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 Y_RNA.16-201ENST00000362421 102 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 RNU6-335P-201ENST00000364563 113 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 SNORA40C-201ENST00000391285 128 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 RPS29P13-201ENST00000402041 169 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 ISCUP1-201ENST00000454451 448 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 AC034236.1-201ENST00000469891 373 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 AC022133.1-201ENST00000490961 571 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 RNU7-200P-201ENST00000516105 62 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 Y_RNA.706-201ENST00000516933 99 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 SNORA31.19-201ENST00000517079 126 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 RPL23AP78-201ENST00000599928 470 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 AL356489.2-201ENST00000566968 3528 ntBASIC5.28□□□□□ -1.56
RNF135Q8IUD6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF135Q8IUD6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.56
RNF135Q8IUD6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RNF135Q8IUD6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF135Q8IUD6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RNF135Q8IUD6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF135Q8IUD6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF135Q8IUD6 RNU6-1117P-201ENST00000384525 104 ntBASIC5.27□□□□□ -1.57
RNF135Q8IUD6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms