Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 RNU6-1249P-201ENST00000363237 111 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 RNY1P11-201ENST00000363759 113 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 RNU6-1180P-201ENST00000364935 107 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 MIR488-201ENST00000365739 83 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 AC068538.1-201ENST00000376856 336 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 Y_RNA.405-201ENST00000383979 100 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 RNU6-36P-201ENST00000384172 107 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 Y_RNA.451-201ENST00000384200 100 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 Y_RNA.524-201ENST00000384564 100 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 Y_RNA.561-201ENST00000384694 100 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 MIR548A3-201ENST00000385297 97 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 HMGN2P32-201ENST00000444648 269 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 RN7SL459P-201ENST00000481078 302 ntBASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TRAF7Q6Q0C0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 AC107027.3-201ENST00000565095 3473 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 U3.22-201ENST00000391120 215 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 AC016397.1-201ENST00000412463 242 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 WARS2P1-201ENST00000429678 537 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 RPS29P10-201ENST00000439197 166 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 RPS26P21-201ENST00000475397 348 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 ANXA2P1-201ENST00000505539 926 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 GMPSP1-201ENST00000514075 579 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 RNA5SP43-201ENST00000516559 110 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 AP003730.1-201ENST00000524605 285 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 EDDM3DP-201ENST00000554692 434 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 AC209154.1-201ENST00000582156 337 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 MIR548AC-201ENST00000585049 88 ntBASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TRAF7Q6Q0C0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AC010266.2-201ENST00000564741 3255 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AC126755.2-208ENST00000327792 462 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AC138969.1-213ENST00000331436 462 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 FTLP6-201ENST00000355274 422 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 RNU6-837P-201ENST00000391056 108 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 RNU6-554P-201ENST00000410466 106 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 RNU6-712P-201ENST00000410558 100 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 RAB9AP3-201ENST00000412737 573 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AC005154.2-201ENST00000438110 379 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 RAB9AP1-201ENST00000449393 573 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 RN7SKP210-201ENST00000459176 261 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AC073901.1-201ENST00000462471 408 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AC140172.1-201ENST00000502928 141 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 COX6B1P5-201ENST00000509843 249 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 RN7SKP260-201ENST00000516907 149 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 SRGNP1-201ENST00000603392 451 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 SNORD91B-202ENST00000608459 222 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 AL354798.1-201ENST00000622505 329 ntBASIC5.66□□□□□ -1.5
TRAF7Q6Q0C0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms