Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 OR52H1-202ENST00000641796 1061 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 MFSD8-242ENST00000641690 4199 ntBASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM88Q6PEY1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 RNU1-32P-201ENST00000363937 159 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 U3.12-201ENST00000364498 214 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 Y_RNA.414-201ENST00000384011 101 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 MIR141-201ENST00000384975 95 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 AL445189.1-201ENST00000405722 338 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 MTND3P8-201ENST00000412909 339 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 USP9YP20-201ENST00000419224 558 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 AC099548.1-201ENST00000421443 426 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 MTCO3P46-201ENST00000425787 232 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 RPS12P10-201ENST00000427031 377 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 MYL8P-204ENST00000431574 518 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 MRPL50P4-201ENST00000446432 475 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 SNORA14.1-201ENST00000516113 141 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 HMGB1P14-201ENST00000557424 591 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 AC105129.1-201ENST00000560250 297 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 MTCO3P23-201ENST00000561363 289 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 MIR4715-201ENST00000584117 79 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 AC005498.1-201ENST00000592125 465 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 AC007938.3-201ENST00000604965 623 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 MTND4LP5-201ENST00000605152 292 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 AL133216.2-202ENST00000634512 349 ntBASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM88Q6PEY1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 UBE3AP2-201ENST00000429033 2259 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AL359693.1-201ENST00000614959 2407 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AC121333.1-201ENST00000567488 2709 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 Y_RNA.142-201ENST00000363491 102 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RNU6-266P-201ENST00000364225 107 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 Y_RNA.356-201ENST00000365475 113 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RNU6-1035P-201ENST00000384477 107 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RPL21P17-201ENST00000397467 475 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AL122016.1-201ENST00000403365 367 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RNU2-3P-201ENST00000410144 191 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AL592148.1-201ENST00000413568 445 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 CYCSP33-201ENST00000414485 327 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AL353621.1-201ENST00000418219 243 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 PGBD4P6-201ENST00000421501 610 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RPL23AP52-201ENST00000439311 478 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AC093019.1-201ENST00000443135 252 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AL590664.1-201ENST00000448065 339 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 snoU13.28-201ENST00000459235 104 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RNU6-329P-201ENST00000459618 107 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RPL7P43-201ENST00000478876 753 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RPS29P20-201ENST00000489592 171 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AC103851.1-201ENST00000506833 274 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RNU1-103P-201ENST00000516502 125 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RN7SKP83-201ENST00000516512 178 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 RNU6-323P-201ENST00000521915 107 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AC063950.1-201ENST00000552036 308 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AC005668.1-201ENST00000571142 476 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 MIR4425-201ENST00000580572 84 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 MIR5096-201ENST00000583713 70 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 MIR5692C1-201ENST00000585309 91 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 MIR6076-201ENST00000617521 113 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AP005019.3-201ENST00000620418 560 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AC006111.3-201ENST00000622137 383 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AC073308.1-201ENST00000623696 305 ntBASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.23□□□□□ -1.89
TMEM88Q6PEY1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMEM88Q6PEY1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms