Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AL031176.1-201ENST00000604554 466 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.21□□□□□ -1.74
KRT40Q6A162 AL162730.1-201ENST00000605734 292 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 DUSP12P1-201ENST00000612874 516 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 TUG1_2.1-201ENST00000614234 87 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRT40Q6A162 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
KRT40Q6A162 uc_338.11-201ENST00000619132 160 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 MIR6852-201ENST00000621699 66 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 MTND4LP32-201ENST00000636111 270 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 U6.114-201ENST00000636407 96 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRT40Q6A162 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRT40Q6A162 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRT40Q6A162 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 AC007656.2-201ENST00000624902 4547 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.21□□□□□ -1.74
KRT40Q6A162 AP001486.2-201ENST00000561652 5113 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
KRT40Q6A162 AC121333.1-201ENST00000567488 2709 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.21□□□□□ -1.74
KRT40Q6A162 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.21□□□□□ -1.74
KRT40Q6A162 MTCO1P9-201ENST00000505577 1534 ntBASIC4.21□□□□□ -1.74
KRT40Q6A162 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.21□□□□□ -1.74
KRT40Q6A162 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRT40Q6A162 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRT40Q6A162 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.2□□□□□ -1.74
KRT40Q6A162 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.2□□□□□ -1.74
KRT40Q6A162 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
KRT40Q6A162 RNA5SP42-201ENST00000364278 115 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 RNA5SP267-201ENST00000364893 126 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 AL133412.1-201ENST00000380194 2992 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 RNU6-550P-201ENST00000391057 101 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 SNORA75.4-201ENST00000391278 119 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 MIR548K-201ENST00000408406 116 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 RNU4-78P-201ENST00000410940 126 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 VN1R36P-201ENST00000414936 291 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.2□□□□□ -1.74
KRT40Q6A162 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.2□□□□□ -1.74
KRT40Q6A162 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.2□□□□□ -1.74
KRT40Q6A162 NIPA2P5-201ENST00000452282 464 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 Y_RNA.639-201ENST00000458981 102 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 snoU13.3-201ENST00000459441 104 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 RPS27AP1-201ENST00000475545 471 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 RPL7P23-201ENST00000493874 747 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 MTCO1P29-201ENST00000496868 288 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.2□□□□□ -1.74
KRT40Q6A162 RNU6-559P-201ENST00000516151 98 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 Y_RNA.682-201ENST00000516457 100 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 Y_RNA.718-201ENST00000517110 102 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.2□□□□□ -1.74
KRT40Q6A162 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRT40Q6A162 ELOCP31-201ENST00000540463 467 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 AC007458.1-201ENST00000542812 373 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.2□□□□□ -1.74
KRT40Q6A162 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.2□□□□□ -1.74
KRT40Q6A162 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
KRT40Q6A162 MIR3171-201ENST00000584270 74 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 AC008521.1-201ENST00000587471 187 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 AC006254.3-201ENST00000603353 884 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 DPPA3P3-201ENST00000603842 430 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 APOOP1-201ENST00000604695 592 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 Z82243.1-201ENST00000609432 473 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 AC134503.1-201ENST00000633048 54 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 AL732372.2-225ENST00000642124 456 ntBASIC4.2□□□□□ -1.74
KRT40Q6A162 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
KRT40Q6A162 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.2□□□□□ -1.74
KRT40Q6A162 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
KRT40Q6A162 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.2□□□□□ -1.74
KRT40Q6A162 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KRT40Q6A162 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.19□□□□□ -1.74
KRT40Q6A162 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
KRT40Q6A162 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KRT40Q6A162 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
KRT40Q6A162 AL592437.2-201ENST00000421655 2434 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 MIR369-201ENST00000362155 70 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 RNU6-1252P-201ENST00000363054 104 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 Y_RNA.315-201ENST00000365117 102 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 SNORA70E-201ENST00000384492 135 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
KRT40Q6A162 MIR548P-201ENST00000408336 84 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 MIR548F5-201ENST00000408421 86 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 RNA5SP239-201ENST00000410218 129 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 RNU4-65P-201ENST00000410473 140 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 ARL5AP1-201ENST00000418991 388 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 RPL21P112-201ENST00000434403 463 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KRT40Q6A162 GTF2IP13-201ENST00000438487 386 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 BRK1P2-201ENST00000442875 223 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 MTCO3P45-201ENST00000443036 613 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 AC008481.1-201ENST00000463278 396 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 AC010631.1-201ENST00000474150 156 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.19□□□□□ -1.74
KRT40Q6A162 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.19□□□□□ -1.74
KRT40Q6A162 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.19□□□□□ -1.74
KRT40Q6A162 RNU6-327P-201ENST00000516270 127 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 AC090136.1-201ENST00000520009 240 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 AP000889.2-201ENST00000532684 490 ntBASIC4.19□□□□□ -1.74
KRT40Q6A162 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.19□□□□□ -1.74
KRT40Q6A162 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms