Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 MIR5692C1-201ENST00000585309 91 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSRP1Q08945 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.44□□□□□ -1.7
SSRP1Q08945 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.44□□□□□ -1.7
SSRP1Q08945 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSRP1Q08945 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
SSRP1Q08945 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.44□□□□□ -1.7
SSRP1Q08945 RPS4XP5-202ENST00000449995 1334 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 AL133412.1-201ENST00000380194 2992 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSRP1Q08945 MAPK10-373ENST00000641983 6772 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSRP1Q08945 Y_RNA.212-201ENST00000364177 102 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 Y_RNA.245-201ENST00000364493 95 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 RNA5SP515-201ENST00000364570 118 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSRP1Q08945 Y_RNA.431-201ENST00000384086 102 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 Y_RNA.480-201ENST00000384364 102 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 MIR548K-201ENST00000408406 116 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 SNORA3.3-201ENST00000408712 125 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 RN7SKP27-201ENST00000410684 333 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 VN1R36P-201ENST00000414936 291 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 RPL21P109-201ENST00000422213 475 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 AC073063.1-201ENST00000434352 607 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.43□□□□□ -1.7
SSRP1Q08945 AC009237.8-201ENST00000445492 379 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 AL360271.2-201ENST00000447710 161 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.43□□□□□ -1.7
SSRP1Q08945 VN1R17P-201ENST00000472048 1090 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 RN7SL323P-201ENST00000494712 295 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.43□□□□□ -1.7
SSRP1Q08945 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.43□□□□□ -1.7
SSRP1Q08945 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.43□□□□□ -1.7
SSRP1Q08945 RNU6-566P-201ENST00000516790 107 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 RNA5SP290-201ENST00000517133 127 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.43□□□□□ -1.7
SSRP1Q08945 CBX3P7-201ENST00000532876 502 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 MIR1273C-201ENST00000578669 77 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 AC023043.2-201ENST00000589678 1026 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 AC073539.2-201ENST00000597113 165 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 AL137849.1-201ENST00000604767 169 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 FAM157A-202ENST00000615155 405 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSRP1Q08945 AL160413.1-201ENST00000622780 310 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 FP236240.3-201ENST00000623061 327 ntBASIC4.43□□□□□ -1.7
SSRP1Q08945 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSRP1Q08945 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSRP1Q08945 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSRP1Q08945 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSRP1Q08945 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSRP1Q08945 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SSRP1Q08945 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SSRP1Q08945 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.43□□□□□ -1.7
SSRP1Q08945 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSRP1Q08945 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSRP1Q08945 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSRP1Q08945 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SSRP1Q08945 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSRP1Q08945 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.42□□□□□ -1.7
SSRP1Q08945 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSRP1Q08945 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSRP1Q08945 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSRP1Q08945 RNA5SP502-201ENST00000362694 119 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 Y_RNA.339-201ENST00000365325 102 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 XGY1-201ENST00000381172 446 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 U1.1-201ENST00000384101 164 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 MIR548F5-201ENST00000408421 86 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 AL139396.1-201ENST00000421137 167 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.42□□□□□ -1.7
SSRP1Q08945 GPM6BP2-201ENST00000432046 144 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 AC236972.2-201ENST00000434979 310 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.42□□□□□ -1.7
SSRP1Q08945 SNORA71B-202ENST00000439232 272 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 GPM6BP1-201ENST00000446387 144 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 AC107399.1-201ENST00000451226 265 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 FABP5P15-201ENST00000453566 214 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 Y_RNA.635-201ENST00000459041 101 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 Y_RNA.632-201ENST00000459189 102 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 AC117503.1-201ENST00000472241 394 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.42□□□□□ -1.7
SSRP1Q08945 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.42□□□□□ -1.7
SSRP1Q08945 RAC1P2-201ENST00000511164 579 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 RPL39P5-202ENST00000512505 151 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 RNA5SP164-201ENST00000516533 110 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 SNORA25.17-201ENST00000517184 124 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 RNA5SP454-201ENST00000517231 127 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.42□□□□□ -1.7
SSRP1Q08945 AL157871.3-201ENST00000557231 293 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.42□□□□□ -1.7
SSRP1Q08945 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.42□□□□□ -1.7
SSRP1Q08945 POLR3GP2-201ENST00000588366 668 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 BRDTP1-201ENST00000605735 677 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.42□□□□□ -1.7
SSRP1Q08945 AL354798.1-201ENST00000622505 329 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 AC099654.10-201ENST00000640395 161 ntBASIC4.42□□□□□ -1.7
SSRP1Q08945 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SSRP1Q08945 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSRP1Q08945 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SSRP1Q08945 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.41□□□□□ -1.7
SSRP1Q08945 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms