Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RPL7P18-201ENST00000478965 734 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.52□□□□□ -2.17
H3F3AP84243 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.52□□□□□ -2.17
H3F3AP84243 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.52□□□□□ -2.17
H3F3AP84243 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
H3F3AP84243 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.52□□□□□ -2.17
H3F3AP84243 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.52□□□□□ -2.17
H3F3AP84243 RNA5SP112-201ENST00000515937 99 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 snoZ278.1-201ENST00000517059 112 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 NRON-201ENST00000517270 370 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.52□□□□□ -2.17
H3F3AP84243 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.52□□□□□ -2.17
H3F3AP84243 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
H3F3AP84243 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.52□□□□□ -2.17
H3F3AP84243 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.52□□□□□ -2.17
H3F3AP84243 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.52□□□□□ -2.17
H3F3AP84243 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.52□□□□□ -2.17
H3F3AP84243 AC005261.5-201ENST00000596280 355 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.52□□□□□ -2.17
H3F3AP84243 AC024257.5-201ENST00000612739 531 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 AC084824.4-201ENST00000620106 731 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.52□□□□□ -2.17
H3F3AP84243 AL158801.5-201ENST00000623123 465 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 AC116618.1-201ENST00000634617 774 ntBASIC1.52□□□□□ -2.17
H3F3AP84243 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
H3F3AP84243 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
H3F3AP84243 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.51□□□□□ -2.17
H3F3AP84243 Z98749.2-208ENST00000381646 500 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 MIR504-201ENST00000385065 83 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 TOMM20P4-201ENST00000427861 435 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 RPL7P12-201ENST00000446719 750 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 COX6CP18-201ENST00000448769 222 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.51□□□□□ -2.17
H3F3AP84243 ATG12P2-201ENST00000456830 416 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 snoU109.1-201ENST00000459339 135 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
H3F3AP84243 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.51□□□□□ -2.17
H3F3AP84243 CKS1BP2-201ENST00000497342 240 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 FAM92A1P2-202ENST00000504766 877 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 AC020699.1-201ENST00000505161 445 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.51□□□□□ -2.17
H3F3AP84243 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.51□□□□□ -2.17
H3F3AP84243 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.51□□□□□ -2.17
H3F3AP84243 AC124283.4-201ENST00000581815 456 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 AP001269.3-201ENST00000588718 329 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.51□□□□□ -2.17
H3F3AP84243 AL031274.2-201ENST00000599419 203 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 AC020658.4-201ENST00000613987 684 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 AL596245.1-201ENST00000618994 362 ntBASIC1.51□□□□□ -2.17
H3F3AP84243 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.51□□□□□ -2.17
H3F3AP84243 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.51□□□□□ -2.17
H3F3AP84243 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.51□□□□□ -2.17
H3F3AP84243 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
H3F3AP84243 AL627390.1-201ENST00000396055 340 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 RNA5SP450-201ENST00000411206 102 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 AL161449.1-201ENST00000414531 1199 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 RPS24P7-201ENST00000416921 246 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 MTCYBP38-201ENST00000417160 1123 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 AL353729.1-201ENST00000425044 720 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 HSPE1P21-201ENST00000438283 308 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 GXYLT1P1-201ENST00000446657 490 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.5□□□□□ -2.17
H3F3AP84243 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.5□□□□□ -2.17
H3F3AP84243 RPS15AP17-201ENST00000470598 390 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 BZW1P2-201ENST00000473537 826 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 AC079203.1-201ENST00000487972 404 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 AC055855.1-201ENST00000489563 579 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.5□□□□□ -2.17
H3F3AP84243 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
H3F3AP84243 MRPS33P3-201ENST00000513456 322 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 RNA5SP137-201ENST00000516833 135 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 CBX3P4-201ENST00000538909 354 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 NACAP3-201ENST00000552100 481 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.5□□□□□ -2.17
H3F3AP84243 LINC00933-203ENST00000559812 219 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 DEFB122-202ENST00000569013 197 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 MIR3167-201ENST00000579623 85 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.5□□□□□ -2.17
H3F3AP84243 AL035411.2-201ENST00000604022 421 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.5□□□□□ -2.17
H3F3AP84243 AC106052.1-201ENST00000608029 497 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 AC091834.1-201ENST00000614543 472 ntBASIC1.5□□□□□ -2.17
H3F3AP84243 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.5□□□□□ -2.17
H3F3AP84243 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.5□□□□□ -2.17
H3F3AP84243 ADAM3A-203ENST00000461344 2157 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
H3F3AP84243 AL357078.2-201ENST00000416486 427 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.49□□□□□ -2.17
H3F3AP84243 PGBD4P6-201ENST00000421501 610 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.49□□□□□ -2.17
H3F3AP84243 MTCYBP32-201ENST00000427945 1084 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.49□□□□□ -2.17
H3F3AP84243 SNRPEP9-201ENST00000436794 238 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.49□□□□□ -2.17
H3F3AP84243 RPL39P6-201ENST00000448289 150 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 RPL7P55-201ENST00000450522 746 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.49□□□□□ -2.17
H3F3AP84243 AC244505.3-201ENST00000454598 187 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms