Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.67□□□□□ -1.82
NKX6-1P78426 AC018555.1-201ENST00000567548 1980 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NKX6-1P78426 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 FTLP6-201ENST00000355274 422 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 MIR208A-201ENST00000362287 71 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 Y_RNA.61-201ENST00000362835 102 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 RNU6-1252P-201ENST00000363054 104 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 RNA5SP130-201ENST00000364431 114 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 RNU6-217P-201ENST00000384164 104 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 SNORD66.1-201ENST00000391230 76 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 RPS4XP3-201ENST00000398541 413 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.67□□□□□ -1.82
NKX6-1P78426 RNA5SP36-201ENST00000410197 133 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 TOMM20P4-201ENST00000427861 435 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.67□□□□□ -1.82
NKX6-1P78426 HMGB1P18-201ENST00000438801 619 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 RPL23AP89-201ENST00000439324 255 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 RANP8-201ENST00000444720 713 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.67□□□□□ -1.82
NKX6-1P78426 ABCF2P2-201ENST00000450549 296 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.67□□□□□ -1.82
NKX6-1P78426 RNU7-66P-201ENST00000459469 62 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 AL135752.1-201ENST00000479477 471 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 RPL21P13-201ENST00000488305 481 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 FGF7P4-201ENST00000509595 295 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 AC099522.1-202ENST00000514718 367 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 RNU6-1069P-201ENST00000516612 133 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 MIR2114-201ENST00000516645 80 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 RNU6-256P-201ENST00000516747 97 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 AC025755.1-201ENST00000521306 278 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 AP000889.2-201ENST00000532684 490 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 TRAV37-201ENST00000553906 342 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 SCOCP1-201ENST00000554676 349 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 C8orf59P2-201ENST00000603441 271 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 AC021646.1-201ENST00000605469 484 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 AC087045.1-201ENST00000605856 382 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 FTX_3.1-201ENST00000610451 147 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 AC002076.2-201ENST00000617362 122 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NKX6-1P78426 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.67□□□□□ -1.82
NKX6-1P78426 AC008013.2-202ENST00000637965 364 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 RLIMP1-201ENST00000339626 1680 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NKX6-1P78426 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.67□□□□□ -1.82
NKX6-1P78426 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NKX6-1P78426 AC002546.1-201ENST00000588041 2504 ntBASIC3.67□□□□□ -1.82
NKX6-1P78426 AF127577.6-201ENST00000623352 2191 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NKX6-1P78426 AP001486.2-201ENST00000561652 5113 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NKX6-1P78426 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX6-1P78426 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX6-1P78426 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.66□□□□□ -1.82
NKX6-1P78426 Y_RNA.11-201ENST00000362375 109 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
NKX6-1P78426 Y_RNA.529-201ENST00000384586 119 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 RNU6-607P-201ENST00000411283 108 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 GOT2P5-201ENST00000433995 546 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 RPL23AP83-201ENST00000434984 473 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 SNORA71B-202ENST00000439232 272 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX6-1P78426 MTCO1P29-201ENST00000496868 288 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX6-1P78426 MIR892C-201ENST00000516410 77 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 AC087854.1-201ENST00000519706 414 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 AC105029.1-201ENST00000520250 669 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 RNU6-323P-201ENST00000521915 107 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.66□□□□□ -1.82
NKX6-1P78426 HMGB1P14-201ENST00000557424 591 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX6-1P78426 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.66□□□□□ -1.82
NKX6-1P78426 RPS3AP23-202ENST00000574601 686 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 LRRC37A5P-203ENST00000580181 585 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 AL355598.1-201ENST00000604169 202 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 AC110741.2-201ENST00000605278 268 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 uc_338.32-201ENST00000615087 172 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 uc_338.15-201ENST00000615470 191 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 AC009233.1-201ENST00000616477 371 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 AL138721.1-201ENST00000616756 179 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 AL359314.1-201ENST00000616913 261 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 MIR6076-201ENST00000617521 113 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 CR392039.5-201ENST00000623201 510 ntBASIC3.66□□□□□ -1.82
NKX6-1P78426 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.66□□□□□ -1.82
NKX6-1P78426 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX6-1P78426 Z82217.1-201ENST00000625157 8149 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms