Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 COX6CP14-201ENST00000469580 174 ntBASIC1.03□□□□□ -2.24
UBA52P62987 RPS3AP22-201ENST00000488297 769 ntBASIC1.03□□□□□ -2.24
UBA52P62987 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
UBA52P62987 AP003033.1-201ENST00000527244 415 ntBASIC1.03□□□□□ -2.24
UBA52P62987 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.03□□□□□ -2.24
UBA52P62987 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.03□□□□□ -2.24
UBA52P62987 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.03□□□□□ -2.24
UBA52P62987 AP005136.1-201ENST00000579765 429 ntBASIC1.03□□□□□ -2.24
UBA52P62987 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.03□□□□□ -2.24
UBA52P62987 AC012669.1-201ENST00000603209 283 ntBASIC1.03□□□□□ -2.24
UBA52P62987 AC080078.3-201ENST00000605407 463 ntBASIC1.03□□□□□ -2.24
UBA52P62987 AL592148.2-201ENST00000612210 372 ntBASIC1.03□□□□□ -2.24
UBA52P62987 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
UBA52P62987 AC090116.1-201ENST00000615679 446 ntBASIC1.03□□□□□ -2.24
UBA52P62987 AP003476.1-201ENST00000623984 516 ntBASIC1.03□□□□□ -2.24
UBA52P62987 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
UBA52P62987 AP000776.1-201ENST00000530032 1663 ntBASIC1.03□□□□□ -2.24
UBA52P62987 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.25
UBA52P62987 AL356421.1-201ENST00000403255 413 ntBASIC1.02□□□□□ -2.25
UBA52P62987 SFR1P2-201ENST00000421841 730 ntBASIC1.02□□□□□ -2.25
UBA52P62987 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.02□□□□□ -2.25
UBA52P62987 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.02□□□□□ -2.25
UBA52P62987 RPL31P60-201ENST00000478450 367 ntBASIC1.02□□□□□ -2.25
UBA52P62987 AC147055.4-201ENST00000504399 745 ntBASIC1.02□□□□□ -2.25
UBA52P62987 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.02□□□□□ -2.25
UBA52P62987 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
UBA52P62987 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.02□□□□□ -2.25
UBA52P62987 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.02□□□□□ -2.25
UBA52P62987 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.02□□□□□ -2.25
UBA52P62987 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.02□□□□□ -2.25
UBA52P62987 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.02□□□□□ -2.25
UBA52P62987 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.02□□□□□ -2.25
UBA52P62987 AC025588.3-201ENST00000604182 274 ntBASIC1.02□□□□□ -2.25
UBA52P62987 AC073413.2-201ENST00000604332 360 ntBASIC1.02□□□□□ -2.25
UBA52P62987 AC104763.3-201ENST00000613765 618 ntBASIC1.02□□□□□ -2.25
UBA52P62987 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
UBA52P62987 RNY1-201ENST00000364228 113 ntBASIC1.01□□□□□ -2.25
UBA52P62987 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.01□□□□□ -2.25
UBA52P62987 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.01□□□□□ -2.25
UBA52P62987 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.01□□□□□ -2.25
UBA52P62987 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
UBA52P62987 RPS4XP11-201ENST00000446897 772 ntBASIC1.01□□□□□ -2.25
UBA52P62987 SUMO2P2-201ENST00000456482 255 ntBASIC1.01□□□□□ -2.25
UBA52P62987 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.01□□□□□ -2.25
UBA52P62987 RNU6-362P-201ENST00000516736 90 ntBASIC1.01□□□□□ -2.25
UBA52P62987 AP005660.1-201ENST00000522972 293 ntBASIC1.01□□□□□ -2.25
UBA52P62987 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.01□□□□□ -2.25
UBA52P62987 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.01□□□□□ -2.25
UBA52P62987 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.01□□□□□ -2.25
UBA52P62987 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.01□□□□□ -2.25
UBA52P62987 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.01□□□□□ -2.25
UBA52P62987 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.01□□□□□ -2.25
UBA52P62987 FAM60CP-201ENST00000591086 664 ntBASIC1.01□□□□□ -2.25
UBA52P62987 AC008121.1-201ENST00000603244 268 ntBASIC1.01□□□□□ -2.25
UBA52P62987 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.01□□□□□ -2.25
UBA52P62987 AC079791.1-201ENST00000605356 973 ntBASIC1.01□□□□□ -2.25
UBA52P62987 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.01□□□□□ -2.25
UBA52P62987 OR5H6-203ENST00000642105 978 ntBASIC1.01□□□□□ -2.25
UBA52P62987 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1□□□□□ -2.25
UBA52P62987 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1□□□□□ -2.25
UBA52P62987 RNU1-93P-201ENST00000364704 169 ntBASIC1□□□□□ -2.25
UBA52P62987 RNU6-939P-201ENST00000384634 107 ntBASIC1□□□□□ -2.25
UBA52P62987 RNU6-748P-201ENST00000384648 107 ntBASIC1□□□□□ -2.25
UBA52P62987 MIR218-1-201ENST00000384999 110 ntBASIC1□□□□□ -2.25
UBA52P62987 AL591704.2-201ENST00000421658 181 ntBASIC1□□□□□ -2.25
UBA52P62987 AC092648.1-201ENST00000425870 423 ntBASIC1□□□□□ -2.25
UBA52P62987 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1□□□□□ -2.25
UBA52P62987 UBE2V1P5-201ENST00000440070 405 ntBASIC1□□□□□ -2.25
UBA52P62987 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1□□□□□ -2.25
UBA52P62987 AC104629.2-201ENST00000468627 598 ntBASIC1□□□□□ -2.25
UBA52P62987 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1□□□□□ -2.25
UBA52P62987 IGHVII-53-1-201ENST00000519538 255 ntBASIC1□□□□□ -2.25
UBA52P62987 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1□□□□□ -2.25
UBA52P62987 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1□□□□□ -2.25
UBA52P62987 MTCYBP27-201ENST00000555160 670 ntBASIC1□□□□□ -2.25
UBA52P62987 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1□□□□□ -2.25
UBA52P62987 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1□□□□□ -2.25
UBA52P62987 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1□□□□□ -2.25
UBA52P62987 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.99□□□□□ -2.25
UBA52P62987 Y_RNA.112-201ENST00000363250 102 ntBASIC0.99□□□□□ -2.25
UBA52P62987 RNU6-1155P-201ENST00000363554 107 ntBASIC0.99□□□□□ -2.25
UBA52P62987 SNORD114-27-201ENST00000363766 70 ntBASIC0.99□□□□□ -2.25
UBA52P62987 RNU4-91P-201ENST00000364778 135 ntBASIC0.99□□□□□ -2.25
UBA52P62987 MIR7-2-201ENST00000384970 110 ntBASIC0.99□□□□□ -2.25
UBA52P62987 MIR613-201ENST00000385248 95 ntBASIC0.99□□□□□ -2.25
UBA52P62987 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.99□□□□□ -2.25
UBA52P62987 MRPL35P3-201ENST00000421557 364 ntBASIC0.99□□□□□ -2.25
UBA52P62987 RPS29P29-201ENST00000456396 171 ntBASIC0.99□□□□□ -2.25
UBA52P62987 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.99□□□□□ -2.25
UBA52P62987 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
UBA52P62987 AF213884.2-201ENST00000510417 903 ntBASIC0.99□□□□□ -2.25
UBA52P62987 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.99□□□□□ -2.25
UBA52P62987 AL359273.1-201ENST00000510918 627 ntBASIC0.99□□□□□ -2.25
UBA52P62987 SNORA44.1-201ENST00000517031 108 ntBASIC0.99□□□□□ -2.25
UBA52P62987 AC107953.1-201ENST00000522216 297 ntBASIC0.99□□□□□ -2.25
UBA52P62987 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.99□□□□□ -2.25
UBA52P62987 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.99□□□□□ -2.25
UBA52P62987 IMMP1LP2-201ENST00000552954 492 ntBASIC0.99□□□□□ -2.25
UBA52P62987 AC087465.1-201ENST00000560574 245 ntBASIC0.99□□□□□ -2.25
UBA52P62987 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms