Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CDC42P4-201ENST00000510507 563 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.78□□□□□ -1.96
VCPP55072 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.78□□□□□ -1.96
VCPP55072 AC145350.1-201ENST00000567426 208 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC012435.1-202ENST00000568772 240 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC090616.3-201ENST00000582184 217 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC009977.1-201ENST00000586015 570 ntBASIC2.78□□□□□ -1.96
VCPP55072 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 MTCYBP22-201ENST00000603788 447 ntBASIC2.78□□□□□ -1.96
VCPP55072 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 AC093838.1-201ENST00000613014 469 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC012150.2-201ENST00000621300 544 ntBASIC2.78□□□□□ -1.96
VCPP55072 AL356266.1-201ENST00000623311 483 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC079248.2-201ENST00000623779 326 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC112204.3-201ENST00000623822 332 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 OR4G2P-202ENST00000641004 1759 ntBASIC2.77□□□□□ -1.97
VCPP55072 SDAD1P2-201ENST00000441308 2028 ntBASIC2.77□□□□□ -1.97
VCPP55072 U8.14-201ENST00000390843 143 ntBASIC2.77□□□□□ -1.97
VCPP55072 RNU4-26P-201ENST00000410270 107 ntBASIC2.77□□□□□ -1.97
VCPP55072 Z85995.1-201ENST00000415547 335 ntBASIC2.77□□□□□ -1.97
VCPP55072 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.77□□□□□ -1.97
VCPP55072 AC099548.1-201ENST00000421443 426 ntBASIC2.77□□□□□ -1.97
VCPP55072 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.77□□□□□ -1.97
VCPP55072 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.77□□□□□ -1.97
VCPP55072 AC008850.1-201ENST00000427546 362 ntBASIC2.77□□□□□ -1.97
VCPP55072 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.77□□□□□ -1.97
VCPP55072 LARP1BP3-201ENST00000437229 869 ntBASIC2.77□□□□□ -1.97
VCPP55072 AL133217.1-201ENST00000450980 425 ntBASIC2.77□□□□□ -1.97
VCPP55072 ART2BP-201ENST00000453501 499 ntBASIC2.77□□□□□ -1.97
VCPP55072 AP000705.1-201ENST00000454567 350 ntBASIC2.77□□□□□ -1.97
VCPP55072 RNU7-23P-201ENST00000459465 62 ntBASIC2.77□□□□□ -1.97
VCPP55072 AC087588.1-201ENST00000462203 316 ntBASIC2.77□□□□□ -1.97
VCPP55072 AC068587.2-201ENST00000478386 781 ntBASIC2.77□□□□□ -1.97
VCPP55072 RPS15AP34-201ENST00000487776 387 ntBASIC2.77□□□□□ -1.97
VCPP55072 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.77□□□□□ -1.97
VCPP55072 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.77□□□□□ -1.97
VCPP55072 MTND1P22-201ENST00000510572 951 ntBASIC2.77□□□□□ -1.97
VCPP55072 RNU6-1256P-201ENST00000516539 103 ntBASIC2.77□□□□□ -1.97
VCPP55072 RNU6-232P-201ENST00000517144 64 ntBASIC2.77□□□□□ -1.97
VCPP55072 AC026407.1-201ENST00000518369 204 ntBASIC2.77□□□□□ -1.97
VCPP55072 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.77□□□□□ -1.97
VCPP55072 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.77□□□□□ -1.97
VCPP55072 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.77□□□□□ -1.97
VCPP55072 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.77□□□□□ -1.97
VCPP55072 MIR3670-2-201ENST00000582974 65 ntBASIC2.77□□□□□ -1.97
VCPP55072 MIR3670-1-201ENST00000584160 65 ntBASIC2.77□□□□□ -1.97
VCPP55072 MIR3670-3-201ENST00000584855 65 ntBASIC2.77□□□□□ -1.97
VCPP55072 AP000403.1-201ENST00000603349 851 ntBASIC2.77□□□□□ -1.97
VCPP55072 MIR3670-4-201ENST00000612260 65 ntBASIC2.77□□□□□ -1.97
VCPP55072 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VCPP55072 TUG1_2.1-201ENST00000614234 87 ntBASIC2.77□□□□□ -1.97
VCPP55072 SNHG22-203ENST00000617833 660 ntBASIC2.77□□□□□ -1.97
VCPP55072 AC120349.3-201ENST00000624377 529 ntBASIC2.77□□□□□ -1.97
VCPP55072 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.77□□□□□ -1.97
VCPP55072 AC006927.3-201ENST00000638789 384 ntBASIC2.77□□□□□ -1.97
VCPP55072 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.77□□□□□ -1.97
VCPP55072 AL138713.1-201ENST00000624026 2130 ntBASIC2.77□□□□□ -1.97
VCPP55072 AL049641.1-201ENST00000441055 1948 ntBASIC2.76□□□□□ -1.97
VCPP55072 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VCPP55072 RNY4P24-201ENST00000362735 96 ntBASIC2.76□□□□□ -1.97
VCPP55072 RNU6-223P-201ENST00000362830 107 ntBASIC2.76□□□□□ -1.97
VCPP55072 Y_RNA.97-201ENST00000363094 102 ntBASIC2.76□□□□□ -1.97
VCPP55072 Y_RNA.226-201ENST00000364337 114 ntBASIC2.76□□□□□ -1.97
VCPP55072 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
VCPP55072 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
VCPP55072 MIR514A1-201ENST00000385133 98 ntBASIC2.76□□□□□ -1.97
VCPP55072 CCNG1P1-201ENST00000406783 885 ntBASIC2.76□□□□□ -1.97
VCPP55072 RNU4-72P-201ENST00000410754 173 ntBASIC2.76□□□□□ -1.97
VCPP55072 RPS27AP14-201ENST00000422868 454 ntBASIC2.76□□□□□ -1.97
VCPP55072 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.76□□□□□ -1.97
VCPP55072 AC092447.3-201ENST00000426027 686 ntBASIC2.76□□□□□ -1.97
VCPP55072 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.76□□□□□ -1.97
VCPP55072 RPL37P21-201ENST00000435890 276 ntBASIC2.76□□□□□ -1.97
VCPP55072 DDX3P2-201ENST00000446138 111 ntBASIC2.76□□□□□ -1.97
VCPP55072 AL353705.4-201ENST00000449661 238 ntBASIC2.76□□□□□ -1.97
VCPP55072 BZW1P2-201ENST00000473537 826 ntBASIC2.76□□□□□ -1.97
VCPP55072 RPL30P6-201ENST00000475925 342 ntBASIC2.76□□□□□ -1.97
VCPP55072 RPL21P99-201ENST00000480369 423 ntBASIC2.76□□□□□ -1.97
VCPP55072 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.76□□□□□ -1.97
VCPP55072 SRIP1-201ENST00000489235 288 ntBASIC2.76□□□□□ -1.97
VCPP55072 RPS15AP36-201ENST00000492022 382 ntBASIC2.76□□□□□ -1.97
VCPP55072 AC005178.1-201ENST00000508392 440 ntBASIC2.76□□□□□ -1.97
VCPP55072 RNU6-1282P-201ENST00000516735 96 ntBASIC2.76□□□□□ -1.97
VCPP55072 HMGB1P41-201ENST00000520234 440 ntBASIC2.76□□□□□ -1.97
VCPP55072 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.76□□□□□ -1.97
VCPP55072 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.76□□□□□ -1.97
VCPP55072 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.76□□□□□ -1.97
VCPP55072 PCMTD1P2-201ENST00000565017 355 ntBASIC2.76□□□□□ -1.97
VCPP55072 MIR4635-201ENST00000583759 79 ntBASIC2.76□□□□□ -1.97
VCPP55072 OR1M4P-201ENST00000589199 287 ntBASIC2.76□□□□□ -1.97
VCPP55072 BNIP3P8-201ENST00000597863 560 ntBASIC2.76□□□□□ -1.97
VCPP55072 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.76□□□□□ -1.97
VCPP55072 BX664608.1-201ENST00000610519 487 ntBASIC2.76□□□□□ -1.97
VCPP55072 AC245517.5-201ENST00000611529 162 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms