Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.06□□□□□ -1.76
ATXN1P54253 MIR4680-201ENST00000580906 66 ntBASIC4.06□□□□□ -1.76
ATXN1P54253 NRBF2P5-201ENST00000603087 788 ntBASIC4.06□□□□□ -1.76
ATXN1P54253 AC245517.5-201ENST00000611529 162 ntBASIC4.06□□□□□ -1.76
ATXN1P54253 FP236240.3-201ENST00000623061 327 ntBASIC4.06□□□□□ -1.76
ATXN1P54253 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.06□□□□□ -1.76
ATXN1P54253 AC100810.6-201ENST00000638068 285 ntBASIC4.06□□□□□ -1.76
ATXN1P54253 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATXN1P54253 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
ATXN1P54253 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATXN1P54253 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.06□□□□□ -1.76
ATXN1P54253 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.06□□□□□ -1.76
ATXN1P54253 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
ATXN1P54253 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATXN1P54253 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.05□□□□□ -1.76
ATXN1P54253 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATXN1P54253 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATXN1P54253 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATXN1P54253 OR1S2-201ENST00000302592 978 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 RNU6-1120P-201ENST00000362988 108 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 RNU6-1097P-201ENST00000363586 107 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 RNU6-1078P-201ENST00000364522 103 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 AC068050.1-201ENST00000394891 380 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 RNA5SP39-201ENST00000411245 120 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 RPS12P24-201ENST00000412619 387 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.05□□□□□ -1.76
ATXN1P54253 ARL5AP4-201ENST00000430731 512 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 RPL23AP30-201ENST00000432419 501 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.05□□□□□ -1.76
ATXN1P54253 MTCO3P45-201ENST00000443036 613 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 HMGB3P22-202ENST00000451823 572 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 HMGN2P16-201ENST00000456802 261 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 BX510359.1-201ENST00000456973 237 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 UBE2DNL-203ENST00000474922 222 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.05□□□□□ -1.76
ATXN1P54253 Y_RNA.680-201ENST00000516441 93 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.05□□□□□ -1.76
ATXN1P54253 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.05□□□□□ -1.76
ATXN1P54253 CYCSP30-201ENST00000546447 172 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 CR383656.7-201ENST00000548164 174 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 AC007375.1-201ENST00000554513 578 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.05□□□□□ -1.76
ATXN1P54253 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.05□□□□□ -1.76
ATXN1P54253 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.05□□□□□ -1.76
ATXN1P54253 uc_338.22-201ENST00000622722 187 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 AL138713.1-201ENST00000624026 2130 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.05□□□□□ -1.76
ATXN1P54253 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATXN1P54253 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.05□□□□□ -1.76
ATXN1P54253 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATXN1P54253 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ATXN1P54253 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ATXN1P54253 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ATXN1P54253 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATXN1P54253 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
ATXN1P54253 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
ATXN1P54253 Y_RNA.148-201ENST00000363557 117 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 RNY3P3-201ENST00000363816 102 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 Y_RNA.395-201ENST00000383945 109 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 RNU6-278P-201ENST00000390945 109 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 RNU2-9P-201ENST00000410194 145 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 RNU4-14P-201ENST00000410858 122 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 MRPL50P2-201ENST00000416821 482 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.04□□□□□ -1.76
ATXN1P54253 AC004552.1-201ENST00000419089 348 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC079780.1-201ENST00000428259 207 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC087650.1-201ENST00000431445 468 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AL159987.2-201ENST00000432754 307 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.04□□□□□ -1.76
ATXN1P54253 HSPD1P21-201ENST00000436541 245 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 BNIP3P2-201ENST00000441221 577 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC079781.2-201ENST00000446424 169 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.04□□□□□ -1.76
ATXN1P54253 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.04□□□□□ -1.76
ATXN1P54253 MRPS17P3-201ENST00000465453 385 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 RPS26P3-201ENST00000470205 348 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.04□□□□□ -1.76
ATXN1P54253 AC083798.1-201ENST00000472671 131 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC090543.2-201ENST00000483963 348 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC004057.1-201ENST00000485827 348 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 RN7SL323P-201ENST00000494712 295 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 HMGB3P15-201ENST00000507326 574 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.04□□□□□ -1.76
ATXN1P54253 SNORA70.14-201ENST00000516205 110 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 RNU6-410P-201ENST00000517006 107 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 RN7SKP256-201ENST00000517201 314 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.04□□□□□ -1.76
ATXN1P54253 OR4R1P-201ENST00000529879 463 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 SNRPGP16-201ENST00000533275 226 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC023050.3-201ENST00000541142 333 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 SYF2P1-201ENST00000550658 413 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 OR4T1P-201ENST00000554933 911 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.04□□□□□ -1.76
ATXN1P54253 AC034105.3-201ENST00000565294 442 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.04□□□□□ -1.76
ATXN1P54253 FAM60BP-201ENST00000578364 658 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC098848.2-201ENST00000588023 330 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AC021646.1-201ENST00000605469 484 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 U2.1-201ENST00000618978 145 ntBASIC4.04□□□□□ -1.76
ATXN1P54253 AL133216.2-202ENST00000634512 349 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms