Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 UCA1.1-201ENST00000620952 75 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 AL589994.2-201ENST00000621124 579 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.06□□□□□ -1.92
LIMK1P53667 AC110994.2-201ENST00000635481 492 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 MTND1P37-201ENST00000636562 264 ntBASIC3.06□□□□□ -1.92
LIMK1P53667 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
LIMK1P53667 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LIMK1P53667 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
LIMK1P53667 RNY1P12-201ENST00000364251 105 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 RNU1-109P-201ENST00000383960 147 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LIMK1P53667 RNU2-33P-201ENST00000410344 192 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.05□□□□□ -1.92
LIMK1P53667 SDCBPP3-201ENST00000419629 891 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 ELOCP4-201ENST00000420090 333 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 RAC1P6-201ENST00000423911 575 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.05□□□□□ -1.92
LIMK1P53667 MTND4P25-201ENST00000441039 533 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.05□□□□□ -1.92
LIMK1P53667 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LIMK1P53667 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.05□□□□□ -1.92
LIMK1P53667 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
LIMK1P53667 NDUFB4P2-201ENST00000509515 391 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.05□□□□□ -1.92
LIMK1P53667 AC114781.4-201ENST00000513707 639 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 RNU6-927P-201ENST00000516199 100 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 RN7SKP258-201ENST00000517151 304 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.05□□□□□ -1.92
LIMK1P53667 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.05□□□□□ -1.92
LIMK1P53667 ARL2BPP2-201ENST00000550907 489 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.05□□□□□ -1.92
LIMK1P53667 AC005498.1-201ENST00000592125 465 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 AC010620.1-201ENST00000601088 1102 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 AL161729.4-201ENST00000604650 476 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.05□□□□□ -1.92
LIMK1P53667 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
LIMK1P53667 AC092140.2-201ENST00000618027 521 ntBASIC3.05□□□□□ -1.92
LIMK1P53667 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LIMK1P53667 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.05□□□□□ -1.92
LIMK1P53667 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
LIMK1P53667 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
LIMK1P53667 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LIMK1P53667 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LIMK1P53667 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LIMK1P53667 Y_RNA.245-201ENST00000364493 95 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 SNORA70B-201ENST00000384210 135 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 SNORD116-2-201ENST00000384274 95 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 RNU6-851P-201ENST00000384565 107 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 RNU6-140P-201ENST00000384566 108 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 SNORD116-6-201ENST00000384711 96 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 RNU2-36P-201ENST00000410361 191 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 RNA5SP229-201ENST00000410809 99 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMK1P53667 AC127391.1-201ENST00000411737 98 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 HMGN1P14-201ENST00000412459 517 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.04□□□□□ -1.92
LIMK1P53667 AL358075.3-201ENST00000426289 226 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 ZNF863P-201ENST00000426746 417 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AC104651.1-201ENST00000427559 735 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMK1P53667 MTND1P28-201ENST00000435623 950 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AL714022.1-201ENST00000439897 151 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 NEFMP1-201ENST00000443423 1006 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 MTND2P4-201ENST00000445034 1004 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 TAF9P1-201ENST00000445421 515 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 TAF9P2-201ENST00000454958 515 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMK1P53667 RN7SL75P-201ENST00000461926 281 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMK1P53667 RN7SKP132-201ENST00000516001 208 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 Y_RNA.695-201ENST00000516715 107 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 RN7SKP272-201ENST00000516988 232 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 RN7SKP40-201ENST00000517211 242 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMK1P53667 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMK1P53667 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.04□□□□□ -1.92
LIMK1P53667 AC103810.1-201ENST00000579873 453 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AC138761.3-201ENST00000579993 334 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 MIR3682-201ENST00000581338 84 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMK1P53667 AL670379.6-201ENST00000603753 252 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AL670379.11-201ENST00000604059 253 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 SEPT7P9-203ENST00000604116 343 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AC008162.1-201ENST00000604718 254 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AL670379.1-201ENST00000604752 252 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AL670379.5-201ENST00000605253 252 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AL670379.12-201ENST00000605291 253 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AL670379.8-201ENST00000605353 252 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.04□□□□□ -1.92
LIMK1P53667 AL670379.7-201ENST00000605823 252 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 AL133173.2-201ENST00000614270 90 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMK1P53667 AP003399.1-201ENST00000637534 361 ntBASIC3.04□□□□□ -1.92
LIMK1P53667 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LIMK1P53667 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms