Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL162395.1-201ENST00000457882 422 ntBASIC3.69□□□□□ -1.82
COPB1P53618 RNU6-333P-201ENST00000459117 107 ntBASIC3.69□□□□□ -1.82
COPB1P53618 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COPB1P53618 RNU4-29P-201ENST00000515943 174 ntBASIC3.69□□□□□ -1.82
COPB1P53618 RNU1-95P-201ENST00000516357 160 ntBASIC3.69□□□□□ -1.82
COPB1P53618 RNU1-128P-201ENST00000516704 160 ntBASIC3.69□□□□□ -1.82
COPB1P53618 SCARNA20.6-201ENST00000517251 106 ntBASIC3.69□□□□□ -1.82
COPB1P53618 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.69□□□□□ -1.82
COPB1P53618 OR5B10P-201ENST00000532869 642 ntBASIC3.69□□□□□ -1.82
COPB1P53618 AC005476.1-201ENST00000554427 397 ntBASIC3.69□□□□□ -1.82
COPB1P53618 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.69□□□□□ -1.82
COPB1P53618 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.69□□□□□ -1.82
COPB1P53618 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.69□□□□□ -1.82
COPB1P53618 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.69□□□□□ -1.82
COPB1P53618 AL356055.1-201ENST00000602528 446 ntBASIC3.69□□□□□ -1.82
COPB1P53618 RNU6-89P-201ENST00000606519 100 ntBASIC3.69□□□□□ -1.82
COPB1P53618 U3.45-201ENST00000607547 219 ntBASIC3.69□□□□□ -1.82
COPB1P53618 AL136221.1-201ENST00000621449 509 ntBASIC3.69□□□□□ -1.82
COPB1P53618 AC025034.2-201ENST00000623264 286 ntBASIC3.69□□□□□ -1.82
COPB1P53618 AC090617.10-201ENST00000624308 134 ntBASIC3.69□□□□□ -1.82
COPB1P53618 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
COPB1P53618 AL133383.2-201ENST00000622958 2336 ntBASIC3.69□□□□□ -1.82
COPB1P53618 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
COPB1P53618 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
COPB1P53618 AL356274.2-201ENST00000624379 3752 ntBASIC3.68□□□□□ -1.82
COPB1P53618 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.68□□□□□ -1.82
COPB1P53618 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
COPB1P53618 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
COPB1P53618 Y_RNA.231-201ENST00000364358 102 ntBASIC3.68□□□□□ -1.82
COPB1P53618 SNORD81.2-201ENST00000365153 76 ntBASIC3.68□□□□□ -1.82
COPB1P53618 SMIM11P1-201ENST00000369586 178 ntBASIC3.68□□□□□ -1.82
COPB1P53618 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
COPB1P53618 RNA5SP293-201ENST00000410527 113 ntBASIC3.68□□□□□ -1.82
COPB1P53618 RPS29P4-201ENST00000414733 161 ntBASIC3.68□□□□□ -1.82
COPB1P53618 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.68□□□□□ -1.82
COPB1P53618 AC245291.1-201ENST00000419501 328 ntBASIC3.68□□□□□ -1.82
COPB1P53618 RAC1P6-201ENST00000423911 575 ntBASIC3.68□□□□□ -1.82
COPB1P53618 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.68□□□□□ -1.82
COPB1P53618 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.68□□□□□ -1.82
COPB1P53618 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.68□□□□□ -1.82
COPB1P53618 AC093019.1-201ENST00000443135 252 ntBASIC3.68□□□□□ -1.82
COPB1P53618 RNU7-180P-201ENST00000459240 63 ntBASIC3.68□□□□□ -1.82
COPB1P53618 FGF7P4-201ENST00000509595 295 ntBASIC3.68□□□□□ -1.82
COPB1P53618 AC098591.2-201ENST00000510152 315 ntBASIC3.68□□□□□ -1.82
COPB1P53618 AC112206.3-201ENST00000514578 389 ntBASIC3.68□□□□□ -1.82
COPB1P53618 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.68□□□□□ -1.82
COPB1P53618 RN7SKP13-201ENST00000515933 244 ntBASIC3.68□□□□□ -1.82
COPB1P53618 RN7SKP289-201ENST00000517244 295 ntBASIC3.68□□□□□ -1.82
COPB1P53618 IGKV2D-19-201ENST00000523346 262 ntBASIC3.68□□□□□ -1.82
COPB1P53618 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.68□□□□□ -1.82
COPB1P53618 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
COPB1P53618 AC078814.3-201ENST00000553036 491 ntBASIC3.68□□□□□ -1.82
COPB1P53618 RPS3AP23-202ENST00000574601 686 ntBASIC3.68□□□□□ -1.82
COPB1P53618 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.68□□□□□ -1.82
COPB1P53618 AL161756.2-201ENST00000604597 246 ntBASIC3.68□□□□□ -1.82
COPB1P53618 AL160281.1-201ENST00000605307 311 ntBASIC3.68□□□□□ -1.82
COPB1P53618 AC021646.1-201ENST00000605469 484 ntBASIC3.68□□□□□ -1.82
COPB1P53618 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COPB1P53618 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.68□□□□□ -1.82
COPB1P53618 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.68□□□□□ -1.82
COPB1P53618 AL137003.2-201ENST00000606924 2538 ntBASIC3.68□□□□□ -1.82
COPB1P53618 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COPB1P53618 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.68□□□□□ -1.82
COPB1P53618 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
COPB1P53618 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.67□□□□□ -1.82
COPB1P53618 GABPAP-201ENST00000419271 1356 ntBASIC3.67□□□□□ -1.82
COPB1P53618 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COPB1P53618 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COPB1P53618 SNORA73.2-201ENST00000364946 201 ntBASIC3.67□□□□□ -1.82
COPB1P53618 RNU6-805P-201ENST00000365643 106 ntBASIC3.67□□□□□ -1.82
COPB1P53618 Y_RNA.529-201ENST00000384586 119 ntBASIC3.67□□□□□ -1.82
COPB1P53618 Y_RNA.576-201ENST00000384781 102 ntBASIC3.67□□□□□ -1.82
COPB1P53618 SNORD17-201ENST00000390930 237 ntBASIC3.67□□□□□ -1.82
COPB1P53618 UBE2V1P2-201ENST00000397758 440 ntBASIC3.67□□□□□ -1.82
COPB1P53618 RN7SKP111-201ENST00000410349 271 ntBASIC3.67□□□□□ -1.82
COPB1P53618 Y_RNA.615-201ENST00000410769 117 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.67□□□□□ -1.82
COPB1P53618 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.67□□□□□ -1.82
COPB1P53618 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.67□□□□□ -1.82
COPB1P53618 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.67□□□□□ -1.82
COPB1P53618 DUTP6-201ENST00000425573 462 ntBASIC3.67□□□□□ -1.82
COPB1P53618 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.67□□□□□ -1.82
COPB1P53618 AC091286.1-201ENST00000431233 461 ntBASIC3.67□□□□□ -1.82
COPB1P53618 ERLEC1P1-201ENST00000433806 578 ntBASIC3.67□□□□□ -1.82
COPB1P53618 CYCSP43-201ENST00000438233 310 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.67□□□□□ -1.82
COPB1P53618 HMGB3P8-201ENST00000449709 577 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.67□□□□□ -1.82
COPB1P53618 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.67□□□□□ -1.82
COPB1P53618 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.67□□□□□ -1.82
COPB1P53618 AC025518.1-201ENST00000479856 347 ntBASIC3.67□□□□□ -1.82
COPB1P53618 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.67□□□□□ -1.82
COPB1P53618 RN7SL432P-201ENST00000484057 298 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AC104619.4-201ENST00000510773 249 ntBASIC3.67□□□□□ -1.82
COPB1P53618 RNU1-143P-201ENST00000516296 146 ntBASIC3.67□□□□□ -1.82
COPB1P53618 RNA5SP503-201ENST00000517047 117 ntBASIC3.67□□□□□ -1.82
COPB1P53618 SNORA70.24-201ENST00000517233 118 ntBASIC3.67□□□□□ -1.82
COPB1P53618 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.67□□□□□ -1.82
COPB1P53618 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.67□□□□□ -1.82
COPB1P53618 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms