Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CLK1P49759 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.09□□□□□ -1.91
CLK1P49759 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.09□□□□□ -1.91
CLK1P49759 RPS3AP4-201ENST00000555161 764 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.09□□□□□ -1.91
CLK1P49759 SNORA59B-202ENST00000578183 701 ntBASIC3.09□□□□□ -1.91
CLK1P49759 MIR3117-201ENST00000584034 78 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.09□□□□□ -1.91
CLK1P49759 CKS1BP3-201ENST00000600888 237 ntBASIC3.09□□□□□ -1.91
CLK1P49759 RPL12P50-201ENST00000603116 116 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AP000860.1-201ENST00000605250 559 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AC007014.2-201ENST00000615581 479 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AC072046.2-201ENST00000618366 268 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AL158209.2-201ENST00000619266 216 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AL359880.1-201ENST00000621879 266 ntBASIC3.09□□□□□ -1.91
CLK1P49759 AC099506.2-201ENST00000623074 221 ntBASIC3.09□□□□□ -1.91
CLK1P49759 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLK1P49759 OR5J1P-201ENST00000313544 939 ntBASIC3.08□□□□□ -1.92
CLK1P49759 RNY4P34-201ENST00000364779 95 ntBASIC3.08□□□□□ -1.92
CLK1P49759 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK1P49759 RNU6-780P-201ENST00000391030 104 ntBASIC3.08□□□□□ -1.92
CLK1P49759 SNORD115-47-201ENST00000391226 86 ntBASIC3.08□□□□□ -1.92
CLK1P49759 RPL21P3-201ENST00000395517 478 ntBASIC3.08□□□□□ -1.92
CLK1P49759 CALM2P3-201ENST00000400429 449 ntBASIC3.08□□□□□ -1.92
CLK1P49759 GSTA9P-201ENST00000406231 611 ntBASIC3.08□□□□□ -1.92
CLK1P49759 RNU2-33P-201ENST00000410344 192 ntBASIC3.08□□□□□ -1.92
CLK1P49759 RNA5SP44-201ENST00000410446 133 ntBASIC3.08□□□□□ -1.92
CLK1P49759 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK1P49759 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK1P49759 AL451074.3-201ENST00000437709 472 ntBASIC3.08□□□□□ -1.92
CLK1P49759 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.08□□□□□ -1.92
CLK1P49759 PSPHP1-201ENST00000450062 261 ntBASIC3.08□□□□□ -1.92
CLK1P49759 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.08□□□□□ -1.92
CLK1P49759 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.08□□□□□ -1.92
CLK1P49759 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLK1P49759 AP001025.2-201ENST00000490908 477 ntBASIC3.08□□□□□ -1.92
CLK1P49759 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.08□□□□□ -1.92
CLK1P49759 AC019235.1-201ENST00000503847 207 ntBASIC3.08□□□□□ -1.92
CLK1P49759 FAM92A1P2-202ENST00000504766 877 ntBASIC3.08□□□□□ -1.92
CLK1P49759 RNU6-201P-201ENST00000517100 61 ntBASIC3.08□□□□□ -1.92
CLK1P49759 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK1P49759 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK1P49759 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK1P49759 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK1P49759 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK1P49759 AC090616.3-201ENST00000582184 217 ntBASIC3.08□□□□□ -1.92
CLK1P49759 AC008739.3-201ENST00000603262 127 ntBASIC3.08□□□□□ -1.92
CLK1P49759 AL359999.1-201ENST00000604513 294 ntBASIC3.08□□□□□ -1.92
CLK1P49759 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.08□□□□□ -1.92
CLK1P49759 AC006133.1-201ENST00000617106 264 ntBASIC3.08□□□□□ -1.92
CLK1P49759 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLK1P49759 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.08□□□□□ -1.92
CLK1P49759 AC110994.2-201ENST00000635481 492 ntBASIC3.08□□□□□ -1.92
CLK1P49759 MIR3688-2-201ENST00000636963 87 ntBASIC3.08□□□□□ -1.92
CLK1P49759 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.08□□□□□ -1.92
CLK1P49759 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLK1P49759 AC131280.1-202ENST00000624067 4211 ntBASIC3.08□□□□□ -1.92
CLK1P49759 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.07□□□□□ -1.92
CLK1P49759 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.07□□□□□ -1.92
CLK1P49759 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLK1P49759 GNG5P1-201ENST00000255500 204 ntBASIC3.07□□□□□ -1.92
CLK1P49759 RNA5SP50-201ENST00000363731 107 ntBASIC3.07□□□□□ -1.92
CLK1P49759 RNU6-853P-201ENST00000364306 107 ntBASIC3.07□□□□□ -1.92
CLK1P49759 Y_RNA.303-201ENST00000364998 94 ntBASIC3.07□□□□□ -1.92
CLK1P49759 SNORA23-201ENST00000365128 182 ntBASIC3.07□□□□□ -1.92
CLK1P49759 RNU4-12P-201ENST00000365233 139 ntBASIC3.07□□□□□ -1.92
CLK1P49759 Y_RNA.372-201ENST00000365599 102 ntBASIC3.07□□□□□ -1.92
CLK1P49759 Y_RNA.450-201ENST00000384198 113 ntBASIC3.07□□□□□ -1.92
CLK1P49759 Y_RNA.548-201ENST00000384656 105 ntBASIC3.07□□□□□ -1.92
CLK1P49759 U3.20-201ENST00000390909 217 ntBASIC3.07□□□□□ -1.92
CLK1P49759 SNORD17-201ENST00000390930 237 ntBASIC3.07□□□□□ -1.92
CLK1P49759 MTCO3P40-201ENST00000392516 676 ntBASIC3.07□□□□□ -1.92
CLK1P49759 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.07□□□□□ -1.92
CLK1P49759 RNU6-516P-201ENST00000411381 104 ntBASIC3.07□□□□□ -1.92
CLK1P49759 HMGN2P31-201ENST00000432430 273 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AC244505.4-201ENST00000434905 287 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.07□□□□□ -1.92
CLK1P49759 RPL35AP22-201ENST00000436855 335 ntBASIC3.07□□□□□ -1.92
CLK1P49759 CYCSP32-201ENST00000440548 321 ntBASIC3.07□□□□□ -1.92
CLK1P49759 SSXP5-201ENST00000443473 287 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AC027673.1-201ENST00000456245 405 ntBASIC3.07□□□□□ -1.92
CLK1P49759 RPL26P9-201ENST00000457466 433 ntBASIC3.07□□□□□ -1.92
CLK1P49759 SNORA84-201ENST00000459229 133 ntBASIC3.07□□□□□ -1.92
CLK1P49759 snoU13.22-201ENST00000459428 104 ntBASIC3.07□□□□□ -1.92
CLK1P49759 RBM43P1-201ENST00000476891 1081 ntBASIC3.07□□□□□ -1.92
CLK1P49759 KC877373.1-201ENST00000479066 408 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AC021382.1-201ENST00000483523 359 ntBASIC3.07□□□□□ -1.92
CLK1P49759 RPS3AP14-201ENST00000483907 780 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AC034222.1-201ENST00000494052 532 ntBASIC3.07□□□□□ -1.92
CLK1P49759 HMGB1P29-201ENST00000505659 499 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.07□□□□□ -1.92
CLK1P49759 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.07□□□□□ -1.92
CLK1P49759 Y_RNA.672-201ENST00000516289 104 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AC022616.6-201ENST00000520479 119 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.07□□□□□ -1.92
CLK1P49759 AK6P1-201ENST00000540219 478 ntBASIC3.07□□□□□ -1.92
CLK1P49759 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.07□□□□□ -1.92
CLK1P49759 AL391840.1-201ENST00000571144 367 ntBASIC3.07□□□□□ -1.92
CLK1P49759 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.07□□□□□ -1.92
CLK1P49759 UBE2L4-201ENST00000587688 464 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms