Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RPL12P3-201ENST00000440080 396 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA4P43681 AL360271.2-201ENST00000447710 161 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 U8.22-201ENST00000459141 133 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 RNU7-87P-201ENST00000459343 62 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 RNU6-1037P-201ENST00000459571 107 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 AC091959.1-201ENST00000495857 238 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 RNU6-352P-201ENST00000516908 107 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 RN7SKP60-201ENST00000516985 239 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA4P43681 AP001880.2-201ENST00000538233 448 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA4P43681 AC104581.2-201ENST00000572227 430 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.81□□□□□ -1.64
CHRNA4P43681 MIR5692C2-201ENST00000577959 77 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA4P43681 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA4P43681 MIR8076-201ENST00000611401 83 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 TUG1_2.1-201ENST00000614234 87 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 AC010329.2-201ENST00000595195 2737 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 AC092079.1-201ENST00000558620 1985 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.81□□□□□ -1.64
CHRNA4P43681 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CHRNA4P43681 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CHRNA4P43681 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA4P43681 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA4P43681 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA4P43681 AC107068.1-201ENST00000563286 4218 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA4P43681 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA4P43681 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA4P43681 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA4P43681 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA4P43681 Y_RNA.23-201ENST00000362496 106 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 Y_RNA.331-201ENST00000365267 102 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AL357139.1-201ENST00000407792 426 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRNA4P43681 AL590762.4-201ENST00000425885 253 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA4P43681 AC005002.2-201ENST00000438228 269 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA4P43681 TDGF1P1-201ENST00000445734 527 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA4P43681 AL162389.1-201ENST00000449233 177 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AC022431.1-201ENST00000450941 438 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AC234775.1-201ENST00000454247 670 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA4P43681 IGLV2-34-201ENST00000490007 283 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AC020890.1-201ENST00000491837 504 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AC005912.1-201ENST00000495392 255 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AC023424.1-201ENST00000496058 459 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 ANXA2P1-201ENST00000505539 926 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA4P43681 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 SNORA27.4-201ENST00000516650 95 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA4P43681 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRNA4P43681 AC093591.2-201ENST00000565254 3843 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 MIR4472-2-201ENST00000582069 67 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 RN7SL435P-201ENST00000584418 282 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AL591926.4-201ENST00000616895 298 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 AC008873.1-201ENST00000625051 138 ntBASIC4.8□□□□□ -1.64
CHRNA4P43681 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CHRNA4P43681 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA4P43681 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA4P43681 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA4P43681 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA4P43681 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CHRNA4P43681 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CHRNA4P43681 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA4P43681 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRNA4P43681 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRNA4P43681 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CHRNA4P43681 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CHRNA4P43681 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA4P43681 RNU1-130P-201ENST00000363930 160 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 RNU6-755P-201ENST00000364400 103 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 MIR539-201ENST00000365690 78 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 Y_RNA.571-201ENST00000384753 98 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 MIR550A3-201ENST00000390735 95 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 RNA5SP113-201ENST00000410486 84 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 CYCSP33-201ENST00000414485 327 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.79□□□□□ -1.64
CHRNA4P43681 UQCRBP2-201ENST00000447827 297 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 AC079354.2-201ENST00000453523 154 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 AL160314.1-201ENST00000490836 438 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.79□□□□□ -1.64
CHRNA4P43681 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA4P43681 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.79□□□□□ -1.64
CHRNA4P43681 AC107918.3-201ENST00000533272 382 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.79□□□□□ -1.64
CHRNA4P43681 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.79□□□□□ -1.64
CHRNA4P43681 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.79□□□□□ -1.64
CHRNA4P43681 AC067852.4-201ENST00000590314 478 ntBASIC4.79□□□□□ -1.64
CHRNA4P43681 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA4P43681 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
CHRNA4P43681 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CHRNA4P43681 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA4P43681 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms