Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.72□□□□□ -1.97
TNFRSF4P43489 AP003399.1-201ENST00000637534 361 ntBASIC2.72□□□□□ -1.97
TNFRSF4P43489 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFRSF4P43489 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
TNFRSF4P43489 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
TNFRSF4P43489 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TNFRSF4P43489 FAM35CP-201ENST00000554755 2470 ntBASIC2.71□□□□□ -1.97
TNFRSF4P43489 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
TNFRSF4P43489 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
TNFRSF4P43489 RNU4-21P-201ENST00000362802 126 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 U3.4-201ENST00000363352 213 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 SNORD116-9-201ENST00000384000 95 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 RNU6-533P-201ENST00000384144 107 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 SNORD116-3-201ENST00000384287 95 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 SNORD116-7-201ENST00000384404 95 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 SNORD116-5-201ENST00000384462 95 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 MIR888-201ENST00000401186 77 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 AL139039.1-201ENST00000401900 692 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFRSF4P43489 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFRSF4P43489 OOSP1P1-201ENST00000423265 274 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 CYCSP46-201ENST00000423569 204 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 HMGB1P27-201ENST00000431429 603 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFRSF4P43489 FTH1P25-201ENST00000447665 469 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 RPL12P25-201ENST00000455592 494 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 AL122001.1-201ENST00000457027 370 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 RN7SL75P-201ENST00000461926 281 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFRSF4P43489 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
TNFRSF4P43489 AC091965.2-201ENST00000512324 613 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 Y_RNA.695-201ENST00000516715 107 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
TNFRSF4P43489 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.71□□□□□ -1.98
TNFRSF4P43489 MIR3124-201ENST00000582636 67 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 AC008739.2-201ENST00000597006 317 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 AL358072.1-201ENST00000604156 575 ntBASIC2.71□□□□□ -1.98
TNFRSF4P43489 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFRSF4P43489 MTND5P29-201ENST00000458676 1807 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TNFRSF4P43489 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 MTND5P7-201ENST00000413558 1798 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
TNFRSF4P43489 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 RNU6-1167P-201ENST00000363227 94 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 RNU4-40P-201ENST00000364351 143 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 RNU5E-5P-201ENST00000365379 116 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 RNY3P13-201ENST00000365542 102 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 SNORA67.4-201ENST00000384688 142 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 NDUFS5P1-201ENST00000405668 289 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 AL451074.5-201ENST00000415894 435 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 SEPT2P1-201ENST00000419651 180 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC006366.1-201ENST00000422002 759 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC010153.1-201ENST00000432862 727 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 SNRPEP9-201ENST00000436794 238 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 MTND4P32-201ENST00000437189 1237 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 COX6CP2-201ENST00000444980 225 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC128713.1-201ENST00000471495 306 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC114786.4-201ENST00000508771 728 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 SNORA9.3-201ENST00000516383 129 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 RN7SKP282-201ENST00000516824 299 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC022616.6-201ENST00000520479 119 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 AP001646.1-201ENST00000527936 915 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC091544.4-201ENST00000555268 342 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AL845331.3-202ENST00000562856 261 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC012065.4-201ENST00000602445 679 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC068276.1-201ENST00000605793 379 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC135507.1-201ENST00000607214 561 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC108747.1-201ENST00000609508 535 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC093783.1-201ENST00000612976 329 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC008498.1-201ENST00000613012 531 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC034102.8-201ENST00000615146 484 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AL158063.1-201ENST00000615349 536 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AL590808.1-201ENST00000618696 141 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 AC025048.6-202ENST00000627667 438 ntBASIC2.7□□□□□ -1.98
TNFRSF4P43489 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.7□□□□□ -1.98
TNFRSF4P43489 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TNFRSF4P43489 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
TNFRSF4P43489 RPL9P7-201ENST00000330965 580 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 RNU6-884P-201ENST00000363889 107 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 SNORD21-201ENST00000383953 95 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 RNY3P10-201ENST00000384764 102 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 RNU6-193P-201ENST00000410977 107 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 RN7SKP142-201ENST00000411236 328 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 RPLP0P7-201ENST00000416050 667 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 SAR1AP4-201ENST00000429225 591 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms