Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC087441.2-201ENST00000529141 262 ntBASIC0.89□□□□□ -2.27
SNCAP37840 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.89□□□□□ -2.27
SNCAP37840 AC084364.2-201ENST00000546924 395 ntBASIC0.89□□□□□ -2.27
SNCAP37840 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
SNCAP37840 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.89□□□□□ -2.27
SNCAP37840 AP000403.1-201ENST00000603349 851 ntBASIC0.89□□□□□ -2.27
SNCAP37840 AC021646.1-201ENST00000605469 484 ntBASIC0.89□□□□□ -2.27
SNCAP37840 AL121652.1-201ENST00000608851 448 ntBASIC0.89□□□□□ -2.27
SNCAP37840 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SNCAP37840 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SNCAP37840 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
SNCAP37840 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SNCAP37840 RNU6-444P-201ENST00000383988 108 ntBASIC0.88□□□□□ -2.27
SNCAP37840 RPL23AP29-201ENST00000397284 453 ntBASIC0.88□□□□□ -2.27
SNCAP37840 PIGPP2-201ENST00000411569 458 ntBASIC0.88□□□□□ -2.27
SNCAP37840 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
SNCAP37840 TOMM20P4-201ENST00000427861 435 ntBASIC0.88□□□□□ -2.27
SNCAP37840 PIGFP3-201ENST00000441918 722 ntBASIC0.88□□□□□ -2.27
SNCAP37840 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.88□□□□□ -2.27
SNCAP37840 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.88□□□□□ -2.27
SNCAP37840 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.88□□□□□ -2.27
SNCAP37840 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.88□□□□□ -2.27
SNCAP37840 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.88□□□□□ -2.27
SNCAP37840 MRPS33P3-201ENST00000513456 322 ntBASIC0.88□□□□□ -2.27
SNCAP37840 SNORD116-30-201ENST00000516468 85 ntBASIC0.88□□□□□ -2.27
SNCAP37840 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.88□□□□□ -2.27
SNCAP37840 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.88□□□□□ -2.27
SNCAP37840 AP000889.1-201ENST00000530968 660 ntBASIC0.88□□□□□ -2.27
SNCAP37840 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.88□□□□□ -2.27
SNCAP37840 AC015688.2-201ENST00000584523 262 ntBASIC0.88□□□□□ -2.27
SNCAP37840 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.88□□□□□ -2.27
SNCAP37840 AC080013.4-201ENST00000607624 649 ntBASIC0.88□□□□□ -2.27
SNCAP37840 AC007349.4-201ENST00000608114 532 ntBASIC0.88□□□□□ -2.27
SNCAP37840 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.88□□□□□ -2.27
SNCAP37840 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SNCAP37840 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SNCAP37840 RNU6-217P-201ENST00000384164 104 ntBASIC0.87□□□□□ -2.27
SNCAP37840 MIR618-201ENST00000385287 98 ntBASIC0.87□□□□□ -2.27
SNCAP37840 RNU4-62P-201ENST00000410125 130 ntBASIC0.87□□□□□ -2.27
SNCAP37840 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.87□□□□□ -2.27
SNCAP37840 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.87□□□□□ -2.27
SNCAP37840 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.87□□□□□ -2.27
SNCAP37840 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.87□□□□□ -2.27
SNCAP37840 C1DP3-201ENST00000455013 423 ntBASIC0.87□□□□□ -2.27
SNCAP37840 BX322784.1-201ENST00000455793 1077 ntBASIC0.87□□□□□ -2.27
SNCAP37840 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.87□□□□□ -2.27
SNCAP37840 AC117503.1-201ENST00000472241 394 ntBASIC0.87□□□□□ -2.27
SNCAP37840 AC093852.1-201ENST00000503587 266 ntBASIC0.87□□□□□ -2.27
SNCAP37840 AC034114.1-201ENST00000520293 285 ntBASIC0.87□□□□□ -2.27
SNCAP37840 AC025918.2-201ENST00000558683 763 ntBASIC0.87□□□□□ -2.27
SNCAP37840 AC023825.1-201ENST00000566704 1030 ntBASIC0.87□□□□□ -2.27
SNCAP37840 AC117490.2-201ENST00000610042 594 ntBASIC0.87□□□□□ -2.27
SNCAP37840 MIR6078-201ENST00000611069 100 ntBASIC0.87□□□□□ -2.27
SNCAP37840 DUXAP10-204ENST00000612052 616 ntBASIC0.87□□□□□ -2.27
SNCAP37840 AC009233.1-201ENST00000616477 371 ntBASIC0.87□□□□□ -2.27
SNCAP37840 AC008443.7-201ENST00000622195 246 ntBASIC0.87□□□□□ -2.27
SNCAP37840 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SNCAP37840 AC005539.1-201ENST00000443768 1479 ntBASIC0.86□□□□□ -2.27
SNCAP37840 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SNCAP37840 RNU6-661P-201ENST00000362409 107 ntBASIC0.86□□□□□ -2.27
SNCAP37840 RNU6-1151P-201ENST00000384684 107 ntBASIC0.86□□□□□ -2.27
SNCAP37840 RNU6-272P-201ENST00000411028 104 ntBASIC0.86□□□□□ -2.27
SNCAP37840 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.86□□□□□ -2.27
SNCAP37840 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.86□□□□□ -2.27
SNCAP37840 DYNLT3P2-201ENST00000442517 295 ntBASIC0.86□□□□□ -2.27
SNCAP37840 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.86□□□□□ -2.27
SNCAP37840 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.86□□□□□ -2.27
SNCAP37840 RNU7-95P-201ENST00000459222 64 ntBASIC0.86□□□□□ -2.27
SNCAP37840 PABPC1P3-201ENST00000469174 459 ntBASIC0.86□□□□□ -2.27
SNCAP37840 AC132942.1-201ENST00000486753 483 ntBASIC0.86□□□□□ -2.27
SNCAP37840 RPS27P23-201ENST00000487608 251 ntBASIC0.86□□□□□ -2.27
SNCAP37840 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.86□□□□□ -2.27
SNCAP37840 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.86□□□□□ -2.27
SNCAP37840 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.86□□□□□ -2.27
SNCAP37840 OR5AK1P-201ENST00000524837 922 ntBASIC0.86□□□□□ -2.27
SNCAP37840 AP002748.2-201ENST00000528671 348 ntBASIC0.86□□□□□ -2.27
SNCAP37840 DUXAP5-201ENST00000529668 529 ntBASIC0.86□□□□□ -2.27
SNCAP37840 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.86□□□□□ -2.27
SNCAP37840 RPS3AP4-201ENST00000555161 764 ntBASIC0.86□□□□□ -2.27
SNCAP37840 AC019288.1-201ENST00000557918 224 ntBASIC0.86□□□□□ -2.27
SNCAP37840 AL391813.1-201ENST00000603098 260 ntBASIC0.86□□□□□ -2.27
SNCAP37840 AP003973.1-201ENST00000604639 691 ntBASIC0.86□□□□□ -2.27
SNCAP37840 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.86□□□□□ -2.27
SNCAP37840 U6.107-201ENST00000637108 79 ntBASIC0.86□□□□□ -2.27
SNCAP37840 OR4G11P-202ENST00000642116 1414 ntBASIC0.86□□□□□ -2.27
SNCAP37840 TEX21P-201ENST00000447107 1476 ntBASIC0.86□□□□□ -2.27
SNCAP37840 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SNCAP37840 MTND5P31-201ENST00000419366 1374 ntBASIC0.85□□□□□ -2.27
SNCAP37840 RNA5SP213-201ENST00000391031 106 ntBASIC0.85□□□□□ -2.27
SNCAP37840 RNU2-63P-201ENST00000410792 194 ntBASIC0.85□□□□□ -2.27
SNCAP37840 RPS12P24-201ENST00000412619 387 ntBASIC0.85□□□□□ -2.27
SNCAP37840 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.85□□□□□ -2.27
SNCAP37840 AL590233.1-201ENST00000430017 456 ntBASIC0.85□□□□□ -2.27
SNCAP37840 RSU1P2-202ENST00000437884 485 ntBASIC0.85□□□□□ -2.27
SNCAP37840 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.85□□□□□ -2.27
SNCAP37840 AL691517.1-201ENST00000440833 1235 ntBASIC0.85□□□□□ -2.27
SNCAP37840 RAB11AP1-201ENST00000442978 646 ntBASIC0.85□□□□□ -2.27
SNCAP37840 RPL39P29-201ENST00000447779 157 ntBASIC0.85□□□□□ -2.27
SNCAP37840 AC087343.1-201ENST00000477341 475 ntBASIC0.85□□□□□ -2.27
SNCAP37840 AC108210.2-201ENST00000503681 201 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms