Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDE6BP35913 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PDE6BP35913 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDE6BP35913 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDE6BP35913 RNU6-511P-201ENST00000363496 107 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 Y_RNA.212-201ENST00000364177 102 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
PDE6BP35913 Y_RNA.476-201ENST00000384347 108 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 MIR19A-201ENST00000384878 82 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 MIR218-2-201ENST00000385006 110 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PDE6BP35913 U3.20-201ENST00000390909 217 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDE6BP35913 NDUFB4P4-201ENST00000404822 243 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDE6BP35913 AL669831.1-202ENST00000428504 417 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 AF228730.2-201ENST00000438784 848 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 AC127537.2-201ENST00000439258 465 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 SUMO1P3-201ENST00000439961 304 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.83□□□□□ -1.64
PDE6BP35913 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.83□□□□□ -1.64
PDE6BP35913 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.83□□□□□ -1.64
PDE6BP35913 Y_RNA.654-201ENST00000497848 106 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.83□□□□□ -1.64
PDE6BP35913 AC116562.3-201ENST00000506136 177 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.83□□□□□ -1.64
PDE6BP35913 RNA5SP164-201ENST00000516533 110 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 AC068587.5-201ENST00000528506 175 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.83□□□□□ -1.64
PDE6BP35913 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.83□□□□□ -1.64
PDE6BP35913 AC069240.1-201ENST00000548774 375 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.83□□□□□ -1.64
PDE6BP35913 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.83□□□□□ -1.64
PDE6BP35913 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.83□□□□□ -1.64
PDE6BP35913 AC104662.1-201ENST00000604448 511 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 AL157817.1-201ENST00000614264 790 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 FAM157A-202ENST00000615155 405 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.83□□□□□ -1.64
PDE6BP35913 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.83□□□□□ -1.64
PDE6BP35913 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.83□□□□□ -1.64
PDE6BP35913 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDE6BP35913 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.82□□□□□ -1.64
PDE6BP35913 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.82□□□□□ -1.64
PDE6BP35913 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDE6BP35913 AC244517.1-201ENST00000606030 2086 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 PRO1804-201ENST00000623780 2050 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDE6BP35913 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDE6BP35913 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.82□□□□□ -1.64
PDE6BP35913 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDE6BP35913 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDE6BP35913 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.82□□□□□ -1.64
PDE6BP35913 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDE6BP35913 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDE6BP35913 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDE6BP35913 RNU5A-8P-201ENST00000364102 114 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 U3.11-201ENST00000364476 212 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDE6BP35913 RNU6-1040P-201ENST00000383974 107 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 Y_RNA.482-201ENST00000384377 111 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 MIR634-201ENST00000385208 97 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 U3.29-201ENST00000391296 212 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 RNU6-847P-201ENST00000411115 108 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 Z92545.1-201ENST00000411782 234 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 AL160275.2-201ENST00000412010 394 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 OR6C66P-201ENST00000414917 930 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.82□□□□□ -1.64
PDE6BP35913 RPL12P25-201ENST00000455592 494 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 RPL39P5-202ENST00000512505 151 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 RNU6-256P-201ENST00000516747 97 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.82□□□□□ -1.64
PDE6BP35913 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.82□□□□□ -1.64
PDE6BP35913 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.82□□□□□ -1.64
PDE6BP35913 AC022968.1-201ENST00000567372 442 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 AC011471.1-201ENST00000585766 187 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 AL031666.3-201ENST00000609320 1006 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 AC012409.4-201ENST00000612923 249 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 AL390240.1-201ENST00000612950 384 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 AL596245.1-201ENST00000618994 362 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 AL162373.1-201ENST00000620433 407 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 AC011155.2-201ENST00000623202 216 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.82□□□□□ -1.64
PDE6BP35913 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.82□□□□□ -1.64
PDE6BP35913 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDE6BP35913 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.82□□□□□ -1.64
PDE6BP35913 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.82□□□□□ -1.64
PDE6BP35913 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
PDE6BP35913 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.82□□□□□ -1.64
PDE6BP35913 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDE6BP35913 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.82□□□□□ -1.64
PDE6BP35913 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.82□□□□□ -1.64
PDE6BP35913 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDE6BP35913 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDE6BP35913 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDE6BP35913 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.81□□□□□ -1.64
PDE6BP35913 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDE6BP35913 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDE6BP35913 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDE6BP35913 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms