Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CIITAP33076 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
CIITAP33076 AL110115.1-201ENST00000614396 364 ntBASIC3.62□□□□□ -1.83
CIITAP33076 PLCE1P1-201ENST00000622094 305 ntBASIC3.62□□□□□ -1.83
CIITAP33076 AC018692.3-201ENST00000623929 123 ntBASIC3.62□□□□□ -1.83
CIITAP33076 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CIITAP33076 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CIITAP33076 CASC19-280ENST00000642102 1351 ntBASIC3.62□□□□□ -1.83
CIITAP33076 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CIITAP33076 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CIITAP33076 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.61□□□□□ -1.83
CIITAP33076 SNORA72.1-201ENST00000363485 129 ntBASIC3.61□□□□□ -1.83
CIITAP33076 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.61□□□□□ -1.83
CIITAP33076 SNORA69-201ENST00000383895 132 ntBASIC3.61□□□□□ -1.83
CIITAP33076 Y_RNA.573-201ENST00000384763 105 ntBASIC3.61□□□□□ -1.83
CIITAP33076 MIR591-201ENST00000385290 95 ntBASIC3.61□□□□□ -1.83
CIITAP33076 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CIITAP33076 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.61□□□□□ -1.83
CIITAP33076 MRPL50P2-201ENST00000416821 482 ntBASIC3.61□□□□□ -1.83
CIITAP33076 OR2AS1P-201ENST00000427827 319 ntBASIC3.61□□□□□ -1.83
CIITAP33076 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.61□□□□□ -1.83
CIITAP33076 MTATP6P16-201ENST00000434543 526 ntBASIC3.61□□□□□ -1.83
CIITAP33076 HMGB3P12-201ENST00000438745 556 ntBASIC3.61□□□□□ -1.83
CIITAP33076 AC079781.2-201ENST00000446424 169 ntBASIC3.61□□□□□ -1.83
CIITAP33076 HMGB3P8-201ENST00000449709 577 ntBASIC3.61□□□□□ -1.83
CIITAP33076 SNRPGP6-201ENST00000451124 220 ntBASIC3.61□□□□□ -1.83
CIITAP33076 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.61□□□□□ -1.83
CIITAP33076 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.61□□□□□ -1.83
CIITAP33076 RN7SL863P-201ENST00000462370 296 ntBASIC3.61□□□□□ -1.83
CIITAP33076 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.61□□□□□ -1.83
CIITAP33076 RPS15AP36-201ENST00000492022 382 ntBASIC3.61□□□□□ -1.83
CIITAP33076 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CIITAP33076 AC117522.1-201ENST00000509821 380 ntBASIC3.61□□□□□ -1.83
CIITAP33076 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.61□□□□□ -1.83
CIITAP33076 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.61□□□□□ -1.83
CIITAP33076 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.61□□□□□ -1.83
CIITAP33076 RNU6-410P-201ENST00000517006 107 ntBASIC3.61□□□□□ -1.83
CIITAP33076 RN7SKP57-201ENST00000517248 293 ntBASIC3.61□□□□□ -1.83
CIITAP33076 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.61□□□□□ -1.83
CIITAP33076 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.61□□□□□ -1.83
CIITAP33076 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.61□□□□□ -1.83
CIITAP33076 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.61□□□□□ -1.83
CIITAP33076 AC060780.3-201ENST00000589464 80 ntBASIC3.61□□□□□ -1.83
CIITAP33076 BDH2P1-201ENST00000602288 736 ntBASIC3.61□□□□□ -1.83
CIITAP33076 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.61□□□□□ -1.83
CIITAP33076 uc_338.25-201ENST00000613756 156 ntBASIC3.61□□□□□ -1.83
CIITAP33076 AL450472.3-201ENST00000615578 367 ntBASIC3.61□□□□□ -1.83
CIITAP33076 MIR6130-201ENST00000619419 109 ntBASIC3.61□□□□□ -1.83
CIITAP33076 YWHAEP7-203ENST00000622054 312 ntBASIC3.61□□□□□ -1.83
CIITAP33076 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.61□□□□□ -1.83
CIITAP33076 MIR3662-201ENST00000637030 95 ntBASIC3.61□□□□□ -1.83
CIITAP33076 AC024614.3-201ENST00000637860 256 ntBASIC3.61□□□□□ -1.83
CIITAP33076 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.61□□□□□ -1.83
CIITAP33076 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CIITAP33076 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CIITAP33076 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.6□□□□□ -1.83
CIITAP33076 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CIITAP33076 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.6□□□□□ -1.83
CIITAP33076 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CIITAP33076 HSPE1P11-201ENST00000339579 310 ntBASIC3.6□□□□□ -1.83
CIITAP33076 RNU6-432P-201ENST00000384196 109 ntBASIC3.6□□□□□ -1.83
CIITAP33076 RNU6-278P-201ENST00000390945 109 ntBASIC3.6□□□□□ -1.83
CIITAP33076 AL353678.1-201ENST00000422735 741 ntBASIC3.6□□□□□ -1.83
CIITAP33076 AC090774.1-201ENST00000435925 246 ntBASIC3.6□□□□□ -1.83
CIITAP33076 RPL35AP22-201ENST00000436855 335 ntBASIC3.6□□□□□ -1.83
CIITAP33076 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.6□□□□□ -1.83
CIITAP33076 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.6□□□□□ -1.83
CIITAP33076 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.6□□□□□ -1.83
CIITAP33076 HMGN1P18-201ENST00000457642 277 ntBASIC3.6□□□□□ -1.83
CIITAP33076 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.6□□□□□ -1.83
CIITAP33076 AC233702.1-201ENST00000482905 502 ntBASIC3.6□□□□□ -1.83
CIITAP33076 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CIITAP33076 AC128657.1-201ENST00000549459 145 ntBASIC3.6□□□□□ -1.83
CIITAP33076 AC125611.2-201ENST00000551907 647 ntBASIC3.6□□□□□ -1.83
CIITAP33076 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.6□□□□□ -1.83
CIITAP33076 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.6□□□□□ -1.83
CIITAP33076 MIR3921-201ENST00000577308 85 ntBASIC3.6□□□□□ -1.83
CIITAP33076 MIR4474-201ENST00000579189 78 ntBASIC3.6□□□□□ -1.83
CIITAP33076 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.6□□□□□ -1.83
CIITAP33076 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.6□□□□□ -1.83
CIITAP33076 AL161756.2-201ENST00000604597 246 ntBASIC3.6□□□□□ -1.83
CIITAP33076 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.6□□□□□ -1.83
CIITAP33076 AC092628.2-201ENST00000622492 339 ntBASIC3.6□□□□□ -1.83
CIITAP33076 AC093648.1-201ENST00000623546 606 ntBASIC3.6□□□□□ -1.83
CIITAP33076 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CIITAP33076 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CIITAP33076 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CIITAP33076 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.6□□□□□ -1.83
CIITAP33076 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CIITAP33076 AC006020.1-201ENST00000420179 1854 ntBASIC3.6□□□□□ -1.83
CIITAP33076 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CIITAP33076 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.6□□□□□ -1.83
CIITAP33076 CKAP2P1-201ENST00000555477 2049 ntBASIC3.6□□□□□ -1.83
CIITAP33076 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.59□□□□□ -1.83
CIITAP33076 AC092326.2-201ENST00000624772 1561 ntBASIC3.59□□□□□ -1.83
CIITAP33076 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CIITAP33076 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CIITAP33076 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CIITAP33076 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CIITAP33076 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms